Resource

Id Histone_ChIP-seq/ENCSR495RJGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR495RJG [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR495RJG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000996/
  • biosample_summary: Homo sapiens vagina tissue female adult (51 years)
  • date_created: 2019-08-23T14:00:46.282520+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR495RJG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR495RJG float

Histone_ChIP-seq_ENCSR495RJG
Histone_ChIP-seq ENCSR495RJG [biosample_summary="Homo sapiens vagina tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR495RJG [1.61, 11.9]
n
146,794,607
mean
4.3
sd
1.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1467946074.56% 104585
chr1 15111001 6.07% 10196
chr2 11964360 4.94% 8602
chr3 9656542 4.87% 6953
chr4 5465574 2.87% 4291
chr5 7282334 4.01% 5471
chr6 7973514 4.67% 6073
chr7 6753641 4.24% 5143
chr8 6017361 4.15% 4505
chr9 6829212 4.93% 4716
chr10 7920062 5.92% 5555
chr11 7811005 5.78% 5388
chr12 7316360 5.49% 5280
chr13 3160359 2.76% 2383
chr14 5080437 4.75% 3475
chr15 5672404 5.56% 3925
chr16 5556010 6.15% 3828
chr17 7943439 9.54% 5129
chr18 2769112 3.45% 2109
chr19 5624316 9.59% 3767
chr20 4300379 6.67% 2996
chr21 1710928 3.66% 1277
chr22 3693153 7.27% 2398
chrX 1183104 0.76% 1125
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 104585 290 40066 1403.59 1059
global segment-length histogram

Files

Filename Size md5
ENCFF005TOV.bed.gz 2.31 MB 89681602e1da850cedec073fcd842481
ENCFF005TOV.tabix.bed.gz 1.08 MB 10bfcc7b2b3df25fd6b06610db49ed28
ENCFF005TOV.tabix.bed.gz.tbi 288.98 KB a6fd4cabfe81c613bd4ca127c14215a7
genomic_resource.yaml 1.71 KB aa81e6f58cbe1db839ac5b066bf8e62b
statistics/