Resource

Id Histone_ChIP-seq/ENCSR494WCXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR494WCX [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR494WCX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male adult (40 years)
  • date_created: 2020-05-01T02:06:33.464261+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR494WCX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR494WCX float

Histone_ChIP-seq_ENCSR494WCX
Histone_ChIP-seq ENCSR494WCX [biosample_summary="Homo sapiens left lung tissue male adult (40 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR494WCX [1.67, 78]
n
107,847,712
mean
13.7
sd
12.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1078477123.35% 68168
chr1 10596822 4.26% 6577
chr2 8284120 3.42% 5433
chr3 7105760 3.58% 4586
chr4 3977405 2.09% 2699
chr5 5245316 2.89% 3479
chr6 6034840 3.53% 3871
chr7 4861964 3.05% 3279
chr8 4144627 2.86% 2808
chr9 4657523 3.37% 2938
chr10 5279163 3.95% 3271
chr11 5568350 4.12% 3389
chr12 5708994 4.28% 3473
chr13 2261012 1.98% 1572
chr14 3683070 3.44% 2229
chr15 3849940 3.77% 2412
chr16 4020076 4.45% 2569
chr17 6195969 7.44% 3601
chr18 1799218 2.24% 1257
chr19 5148091 8.78% 2899
chr20 3327114 5.16% 1997
chr21 1369351 2.93% 857
chr22 2684162 5.28% 1579
chrX 1972462 1.26% 1344
chrY 72363 0.13% 49
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68168 240 39622 1582.09 1141
global segment-length histogram

Files

Filename Size md5
ENCFF683QWQ.bed.gz 1.55 MB da5f699e60fe954a5ed383677782b0c6
ENCFF683QWQ.tabix.bed.gz 730.1 KB 3ee970fd679bb6601777bac87975b75b
ENCFF683QWQ.tabix.bed.gz.tbi 229.63 KB cf2a64cd2fc6aa3409e2a3e6bb3c4978
genomic_resource.yaml 1.71 KB 4ebc846a34f8717e71fb3720fa771fe1
statistics/