Resource

Id Histone_ChIP-seq/ENCSR485LPAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR485LPA [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR485LPA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (59 years)
  • date_created: 2020-05-01T02:55:16.741790+00:00
  • date_released: 2020-09-03
  • doi: 10.17989/ENCSR485LPA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR485LPA float

Histone_ChIP-seq_ENCSR485LPA
Histone_ChIP-seq ENCSR485LPA [biosample_summary="Homo sapiens heart left ventricle tissue female adult (59 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR485LPA [1.68, 8.8]
n
45,961,511
mean
3.73
sd
0.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 459615111.43% 59850
chr1 4701739 1.89% 6012
chr2 3663577 1.51% 4857
chr3 3164522 1.60% 4245
chr4 1641384 0.86% 2327
chr5 2437649 1.34% 3277
chr6 2248637 1.32% 3115
chr7 2022514 1.27% 2811
chr8 1857581 1.28% 2559
chr9 2120441 1.53% 2596
chr10 2697467 2.02% 3350
chr11 2547584 1.89% 3250
chr12 2350489 1.76% 2979
chr13 1056481 0.92% 1448
chr14 1575336 1.47% 2027
chr15 1661099 1.63% 2156
chr16 1643072 1.82% 2078
chr17 2624756 3.15% 3136
chr18 803595 1.00% 1189
chr19 1828996 3.12% 2183
chr20 1360490 2.11% 1732
chr21 399312 0.85% 573
chr22 1356681 2.67% 1613
chrX 198109 0.13% 337
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59850 230 12301 767.95 620
global segment-length histogram

Files

Filename Size md5
ENCFF463WJH.bed.gz 1.19 MB 45562b4b854af5d9d5c4b71960d8df7e
ENCFF463WJH.tabix.bed.gz 615.37 KB 670b9c92f304b1fabe6585ea46d08cc9
ENCFF463WJH.tabix.bed.gz.tbi 214.48 KB 8092df3f4d217becd858fb79bfda47ec
genomic_resource.yaml 1.75 KB dcd8d7a23c2fd42871d0ab3a41a04b64
statistics/