Resource

Id Histone_ChIP-seq/ENCSR482QXOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR482QXO [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR482QXO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (32 years)
  • date_created: 2015-09-15T20:26:53.507798+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR482QXO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (32 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR482QXO float

Histone_ChIP-seq_ENCSR482QXO
Histone_ChIP-seq ENCSR482QXO [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR482QXO [1.82, 21.8]
n
57,859,070
mean
5.35
sd
1.65

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 578590701.80% 71024
chr1 5959563 2.39% 7141
chr2 4433580 1.83% 5561
chr3 3258329 1.64% 4207
chr4 1708460 0.90% 2308
chr5 2648513 1.46% 3374
chr6 3187656 1.87% 4119
chr7 2495915 1.57% 3201
chr8 2171989 1.50% 2710
chr9 2433970 1.76% 2856
chr10 2690687 2.01% 3269
chr11 3275154 2.42% 3779
chr12 2949898 2.21% 3715
chr13 1145420 1.00% 1498
chr14 2123235 1.98% 2592
chr15 2089443 2.05% 2528
chr16 2593929 2.87% 2987
chr17 3765334 4.52% 4314
chr17_GL000205v2_random 1398 0.75% 2
chr18 901896 1.12% 1216
chr19 3360908 5.73% 3811
chr20 1751996 2.72% 2092
chr21 716550 1.53% 892
chr22 1671236 3.29% 1904
chrUn_GL000195v1 594 0.32% 1
chrUn_GL000219v1 4873 2.72% 7
chrX 504517 0.32% 910
chrY 14027 0.02% 30
3339 contigs with no values (128529400 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71024 195 11771 814.64 651
global segment-length histogram

Files

Filename Size md5
ENCFF354JNB.bed.gz 1.33 MB 45321710f45a642f17a7f5391a494ec6
ENCFF354JNB.tabix.bed.gz 698.15 KB b5bd24bfa8a59a1754a0184f92f82391
ENCFF354JNB.tabix.bed.gz.tbi 216.04 KB 46a0ba054453a9b96c4a470122ee0495
genomic_resource.yaml 2.04 KB fb0fc3935fa80642433ba214f9a954db
statistics/