Resource

Id Histone_ChIP-seq/ENCSR480OFKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR480OFK [biosample_summary="Homo sapiens heart tissue male embryo (105 days)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR480OFK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue male embryo (105 days)
  • date_created: 2015-09-15T19:51:50.703292+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR480OFK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (105 days)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR480OFK float

Histone_ChIP-seq_ENCSR480OFK
Histone_ChIP-seq ENCSR480OFK [biosample_summary="Homo sapiens heart tissue male embryo (105 days)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR480OFK [2.09, 47.1]
n
79,017,093
mean
6.58
sd
2.72

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 790170932.46% 92000
chr1 8224367 3.30% 9376
chr2 6556819 2.71% 7649
chr3 5504116 2.78% 6346
chr4 3373505 1.77% 4183
chr5 4594119 2.53% 5417
chr6 4241127 2.48% 5184
chr7 3695800 2.32% 4472
chr8 3584918 2.47% 4251
chr9 3451345 2.49% 3944
chr10 4599328 3.44% 5130
chr11 4403922 3.26% 4981
chr12 3773527 2.83% 4301
chr13 1947029 1.70% 2364
chr14 2364536 2.21% 2659
chr15 3145918 3.08% 3418
chr16 2264639 2.51% 2737
chr17 3754399 4.51% 4189
chr18 1835910 2.28% 2148
chr19 2132596 3.64% 2618
chr20 1997073 3.10% 2269
chr21 695786 1.49% 840
chr22 1986837 3.91% 2080
chrX 871452 0.56% 1407
chrY 18025 0.03% 37
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92000 280 13190 858.88 680
global segment-length histogram

Files

Filename Size md5
ENCFF109AVD.bed.gz 1.58 MB 95163c142670c661a893908308b99780
ENCFF109AVD.tabix.bed.gz 848.7 KB d4ceb7d31781105124e022bdb27c8ac8
ENCFF109AVD.tabix.bed.gz.tbi 288.78 KB 4b5e554de9d48c8a5ebeebc6970bc8fe
genomic_resource.yaml 2.19 KB f1a82d16d52f8e9790d0c90eda2de559
statistics/