Resource

Id Histone_ChIP-seq/ENCSR477BHFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR477BHF [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR477BHF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:02.534307+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR477BHF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR477BHF float

Histone_ChIP-seq_ENCSR477BHF
Histone_ChIP-seq ENCSR477BHF [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR477BHF [1.96, 46.3]
n
37,063,174
mean
14.1
sd
7.84

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 370631741.15% 42331
chr1 3629764 1.46% 4083
chr2 2623087 1.08% 3007
chr3 2228953 1.12% 2408
chr4 1545131 0.81% 1692
chr5 1867341 1.03% 2104
chr6 2192609 1.28% 2440
chr7 1759428 1.10% 2044
chr8 1452847 1.00% 1712
chr9 1548179 1.12% 1806
chr10 1614395 1.21% 1884
chr11 2018976 1.49% 2210
chr12 1933989 1.45% 2212
chr13 875300 0.77% 1012
chr14 1220074 1.14% 1340
chr15 1163274 1.14% 1302
chr16 1392529 1.54% 1619
chr17 1986968 2.39% 2311
chr18 691430 0.86% 839
chr19 2293193 3.91% 2616
chr20 922866 1.43% 1083
chr21 349260 0.75% 438
chr22 778128 1.53% 924
chrX 975453 0.63% 1245
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42331 160 8565 875.56 632
global segment-length histogram

Files

Filename Size md5
ENCFF383THB.bed.gz 949.68 KB 9f9104cf904380639aa049eab837fc41
ENCFF383THB.tabix.bed.gz 446.51 KB 7cd8056b9a5220509669206761eaba55
ENCFF383THB.tabix.bed.gz.tbi 197.0 KB 5acbb9d2fb8b592f60868d0526607c8c
genomic_resource.yaml 1.51 KB e7b5042e616a549392de3c20880a8538
statistics/