Resource

Id Histone_ChIP-seq/ENCSR472CMRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR472CMR [biosample_summary="Homo sapiens BLaER1 9 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR472CMR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 9 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:25.005823+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR472CMR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 9 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR472CMR float

Histone_ChIP-seq_ENCSR472CMR
Histone_ChIP-seq ENCSR472CMR [biosample_summary="Homo sapiens BLaER1 9 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR472CMR [1.5, 15.1]
n
273,995,690
mean
5.36
sd
2.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2739956908.52% 117884
chr1 26078749 10.48% 10690
chr2 22218538 9.17% 9768
chr3 17428794 8.79% 7868
chr4 11831489 6.22% 6006
chr5 15042321 8.29% 6568
chr6 12116641 7.09% 6204
chr7 13467322 8.45% 6472
chr8 13197456 9.09% 5135
chr9 11701707 8.46% 5062
chr10 12789065 9.56% 5621
chr11 12438341 9.21% 5063
chr12 14329970 10.75% 5950
chr13 6586318 5.76% 3116
chr14 8871317 8.29% 4010
chr15 9845694 9.65% 4119
chr16 10639888 11.78% 4045
chr17 13894780 16.69% 5330
chr18 5569863 6.93% 2510
chr19 13879539 23.68% 4521
chr20 7598052 11.79% 2836
chr21 3433799 7.35% 1428
chr22 5956435 11.72% 2250
chrX 5079612 3.26% 3312
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 117884 245 82100 2324.28 1140
global segment-length histogram

Files

Filename Size md5
ENCFF374DQQ.bed.gz 2.72 MB ebfda07b9d3ad5a27792848517d30896
ENCFF374DQQ.tabix.bed.gz 1.22 MB 2fa4e8b71db077c23bc40579c0895e18
ENCFF374DQQ.tabix.bed.gz.tbi 154.58 KB 86f56abf79c755309aa4928fe468c0b4
genomic_resource.yaml 2.31 KB a783d8e99f50750437cab9a71768613c
statistics/