Resource

Id Histone_ChIP-seq/ENCSR463NADcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR463NAD [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR463NAD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue male adult (54 years)
  • date_created: 2018-05-11T18:46:37.904779+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR463NAD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR463NAD float

Histone_ChIP-seq_ENCSR463NAD
Histone_ChIP-seq ENCSR463NAD [biosample_summary="Homo sapiens esophagus squamous epithelium tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR463NAD [1.65, 58.3]
n
80,291,780
mean
13.2
sd
10.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 802917802.50% 56090
chr1 8774896 3.52% 5882
chr1_KI270713v1_random 636 1.56% 1
chr2 5990098 2.47% 4326
chr3 4770239 2.41% 3456
chr4 2775270 1.46% 2213
chr5 3466827 1.91% 2471
chr6 4422992 2.59% 3217
chr7 3250157 2.04% 2420
chr8 2916782 2.01% 2226
chr9 3640575 2.63% 2475
chr10 3935680 2.94% 2797
chr11 4324216 3.20% 2805
chr12 4003546 3.00% 2663
chr13 1545755 1.35% 1183
chr14 2931280 2.74% 1967
chr15 2795357 2.74% 2016
chr16 3249150 3.60% 2264
chr17 4876288 5.86% 3040
chr17_GL000205v2_random 946 0.51% 2
chr18 1410804 1.76% 1076
chr19 4148923 7.08% 2550
chr20 2429058 3.77% 1718
chr21 1056312 2.26% 772
chr22 2159928 4.25% 1425
chrUn_GL000195v1 2372 1.30% 5
chrUn_GL000218v1 350 0.22% 1
chrUn_GL000219v1 1173 0.65% 1
chrUn_KI270438v1 1377 1.22% 3
chrUn_KI270467v1 1328 33.88% 2
chrX 1360681 0.87% 1074
chrY 48784 0.09% 39
3335 contigs with no values (128211083 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56090 215 36812 1431.48 984
global segment-length histogram

Files

Filename Size md5
ENCFF300MWH.bed.gz 1.42 MB 42034ec70d0c84b4c0044fab7ccfb9e3
ENCFF300MWH.tabix.bed.gz 627.19 KB 1e6c71622851c2730ff68a0b113ab6c5
ENCFF300MWH.tabix.bed.gz.tbi 209.13 KB e446161590f6f2abeeae0c679b40064f
genomic_resource.yaml 1.56 KB 58a40736fa0ef9f8e916437ffafd6e72
statistics/