Resource

Id Histone_ChIP-seq/ENCSR463DSJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR463DSJ [biosample_summary="Homo sapiens DOHH2" and target="H3K9me2"]
Description
Labels
  • accession: ENCSR463DSJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002167/
  • biosample_summary: Homo sapiens DOHH2
  • date_created: 2014-02-20T05:05:42.932178+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR463DSJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR463DSJ float

Histone_ChIP-seq_ENCSR463DSJ

Histone_ChIP-seq ENCSR463DSJ [biosample_summary="Homo sapiens DOHH2" and target="H3K9me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR463DSJ [1.81, 4.02]
n
133,164
mean
2.83
sd
0.328

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 133164<0.01% 526
chr1 8599 <0.01% 35
chr2 9942 <0.01% 42
chr3 7238 <0.01% 30
chr4 11325 0.01% 46
chr5 9563 0.01% 41
chr6 7696 <0.01% 30
chr7 41131 0.03% 148
chr8 6137 <0.01% 26
chr9 3459 <0.01% 15
chr10 4401 <0.01% 17
chr11 4165 <0.01% 16
chr12 3580 <0.01% 14
chr13 4494 <0.01% 20
chr14 2245 <0.01% 9
chr15 1352 <0.01% 6
chr16 502 <0.01% 2
chr17 633 <0.01% 3
chr18 3163 <0.01% 13
chr19 639 <0.01% 1
chr20 951 <0.01% 4
chr21 895 <0.01% 4
chr22 763 <0.01% 3
chrX 291 <0.01% 1
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 526 188 675 253.16 236
global segment-length histogram

Files

Filename Size md5
ENCFF833KLI.bed.gz 10.43 KB 7bcceccbb7d5d2c2d5e13720bd66e20f
ENCFF833KLI.tabix.bed.gz 5.63 KB 3118d748edf9000e39c19dfebf433af7
ENCFF833KLI.tabix.bed.gz.tbi 9.74 KB 24abe6d13cbbac25cc8e1994ab8febbc
genomic_resource.yaml 4.21 KB a353ae03ce318cdbc1cb95658d68c1cd
statistics/