Resource

Id Histone_ChIP-seq/ENCSR461LTRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR461LTR [biosample_summary="Homo sapiens MM.1S" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR461LTR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-10-24T16:16:17.607358+00:00
  • date_released: 2016-10-05
  • doi: 10.17989/ENCSR461LTR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR461LTR float

Histone_ChIP-seq_ENCSR461LTR

Histone_ChIP-seq ENCSR461LTR [biosample_summary="Homo sapiens MM.1S" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR461LTR [1.97, 4.56]
n
249,260
mean
3.07
sd
0.429

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2492600.01% 715
chr1 18898 0.01% 56
chr2 21075 0.01% 58
chr3 14711 0.01% 45
chr4 18731 0.01% 57
chr5 14832 0.01% 43
chr6 8291 <0.01% 23
chr7 20398 0.01% 57
chr8 11034 0.01% 34
chr9 11640 0.01% 31
chr10 11294 0.01% 37
chr11 13675 0.01% 37
chr12 11456 0.01% 32
chr13 2913 <0.01% 9
chr15 8971 0.01% 27
chr16 7269 0.01% 21
chr17 1789 <0.01% 5
chr18 7597 0.01% 24
chr19 29509 0.05% 72
chr20 4650 0.01% 16
chr21 5132 0.01% 14
chr22 2354 <0.01% 7
chrX 3041 <0.01% 10
3344 contigs with no values (293348218 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 715 186 1849 348.62 315
global segment-length histogram

Files

Filename Size md5
ENCFF853UHY.bed.gz 15.42 KB accfdb467967b24ca39b4d0f521a3ffd
ENCFF853UHY.tabix.bed.gz 7.73 KB af5c4ded554e468bf0a9173ba4cdba8c
ENCFF853UHY.tabix.bed.gz.tbi 11.88 KB 8cc29f0ff61c5606a7780ee3872aa6b4
genomic_resource.yaml 3.41 KB bc0a76fd9c86b09c0aa130158415c944
statistics/