Resource

Id Histone_ChIP-seq/ENCSR461GYNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR461GYN [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR461GYN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)
  • date_created: 2021-01-28T04:10:51.245756+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR461GYN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (78 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR461GYN float

Histone_ChIP-seq_ENCSR461GYN
Histone_ChIP-seq ENCSR461GYN [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (78 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR461GYN [1.72, 48.5]
n
123,185,166
mean
8.24
sd
5.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1231851663.83% 91125
chr1 12276498 4.93% 8854
chr2 8997612 3.72% 6959
chr3 7561690 3.81% 5740
chr4 4908790 2.58% 3790
chr5 6684639 3.68% 5046
chr6 6506848 3.81% 4857
chr7 5623797 3.53% 4474
chr8 5013306 3.45% 3858
chr9 5919910 4.28% 4239
chr10 6371813 4.76% 4590
chr11 7568968 5.60% 5283
chr12 6241616 4.68% 4698
chr13 2842005 2.49% 2201
chr14 4231989 3.95% 2971
chr15 4190161 4.11% 3072
chr16 4301420 4.76% 3202
chr17 7008247 8.42% 4773
chr18 2546030 3.17% 1929
chr19 4821895 8.23% 3416
chr20 3577778 5.55% 2570
chr21 1225490 2.62% 952
chr22 3056036 6.01% 2149
chrX 1708628 1.09% 1502
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 91125 220 62684 1351.83 887
global segment-length histogram

Files

Filename Size md5
ENCFF089YVE.bed.gz 1.93 MB 917815a7e8254a79d3b181e440dbf304
ENCFF089YVE.tabix.bed.gz 944.49 KB 9580ee7fed9536a4972c9ac744ebaba8
ENCFF089YVE.tabix.bed.gz.tbi 268.88 KB 33abbe2268460a2c70f58d2e554a6b77
genomic_resource.yaml 1.57 KB 8f2816bfa3bd6675c327d3ac3b3de85f
statistics/