Resource

Id Histone_ChIP-seq/ENCSR456TZOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR456TZO [biosample_summary="Homo sapiens lung tissue male child (3 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR456TZO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue male child (3 years)
  • date_created: 2015-10-01T07:17:29.943605+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR456TZO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR456TZO float

Histone_ChIP-seq_ENCSR456TZO
Histone_ChIP-seq ENCSR456TZO [biosample_summary="Homo sapiens lung tissue male child (3 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR456TZO [1.58, 18]
n
6,360,009
mean
5.28
sd
1.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 63600090.20% 15626
chr1 380329 0.15% 979
chr2 421141 0.17% 1149
chr3 331573 0.17% 870
chr4 375008 0.20% 1009
chr5 448312 0.25% 1151
chr6 310568 0.18% 829
chr7 408408 0.26% 1015
chr8 375293 0.26% 961
chr9 255781 0.18% 632
chr10 317971 0.24% 791
chr11 268302 0.20% 698
chr12 364124 0.27% 877
chr13 171843 0.15% 489
chr14 163802 0.15% 447
chr15 169623 0.17% 444
chr16 280623 0.31% 604
chr17 109228 0.13% 284
chr18 130701 0.16% 344
chr19 740466 1.26% 1254
chr20 125203 0.19% 319
chr21 148526 0.32% 320
chr22 32867 0.06% 86
chrX 18879 0.01% 45
chrY 11438 0.02% 29
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 15626 155 5076 407.01 341
global segment-length histogram

Files

Filename Size md5
ENCFF407SMC.bed.gz 278.54 KB 469805a70d03a640f008748105c248b0
ENCFF407SMC.tabix.bed.gz 145.78 KB cde0e408887cc2adbb8622c4f30eed86
ENCFF407SMC.tabix.bed.gz.tbi 105.07 KB 1247ab80606a7f9aa060b647985e6eb3
genomic_resource.yaml 1.96 KB 155c4261953e7597517c1a41c0af1105
statistics/