Resource

Id Histone_ChIP-seq/ENCSR452JBPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR452JBP [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR452JBP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:12.946130+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR452JBP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR452JBP float

Histone_ChIP-seq_ENCSR452JBP
Histone_ChIP-seq ENCSR452JBP [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR452JBP [1.33, 26.2]
n
251,413,102
mean
7.52
sd
3.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2514131027.81% 202747
chr1 23615803 9.49% 18832
chr1_KI270706v1_random 509 0.29% 2
chr1_KI270713v1_random 7779 19.09% 11
chr1_KI270714v1_random 505 1.21% 2
chr2 19594147 8.09% 16074
chr3 14041003 7.08% 12097
chr3_GL000221v1_random 5059 3.26% 9
chr4 9562993 5.03% 8532
chr4_GL000008v2_random 818 0.39% 2
chr5 12502832 6.89% 10431
chr6 12692148 7.43% 10771
chr7 12574335 7.89% 10657
chr8 11896843 8.20% 9258
chr9 10979520 7.93% 8723
chr9_KI270718v1_random 546 1.43% 2
chr9_KI270719v1_random 515 0.29% 1
chr9_KI270720v1_random 250 0.64% 1
chr10 13054045 9.76% 10320
chr11 12087906 8.95% 9582
chr11_KI270721v1_random 1246 1.24% 3
chr12 11565392 8.68% 9332
chr13 5828268 5.10% 5196
chr14 8221688 7.68% 6424
chr14_GL000009v2_random 2474 1.23% 3
chr14_GL000194v1_random 2520 1.32% 4
chr14_GL000225v1_random 1370 0.65% 2
chr14_KI270723v1_random 730 1.92% 1
chr14_KI270724v1_random 301 0.76% 1
chr14_KI270726v1_random 2331 5.33% 4
chr15 8410290 8.25% 6728
chr15_KI270727v1_random 3506 0.78% 5
chr16 10874771 12.04% 8063
chr16_KI270728v1_random 3448 0.18% 6
chr17 13925871 16.73% 10023
chr17_GL000205v2_random 14148 7.62% 10
chr17_KI270729v1_random 672 0.24% 2
chr18 5119937 6.37% 4297
chr19 10083610 17.20% 7641
chr20 8645190 13.42% 6563
chr21 3698865 7.92% 2828
chr22 7360057 14.48% 5033
chr22_KI270731v1_random 2538 1.68% 5
chr22_KI270733v1_random 3496 1.94% 6
chr22_KI270734v1_random 1530 0.93% 3
chrUn_GL000195v1 1904 1.04% 5
chrUn_GL000214v1 1636 1.19% 3
chrUn_GL000216v2 1969 1.11% 2
chrUn_GL000219v1 11335 6.33% 16
chrUn_GL000220v1 419 0.26% 1
chrUn_GL000224v1 1461 0.81% 1
chrUn_KI270438v1 599 0.53% 2
chrUn_KI270442v1 1687 0.43% 2
chrUn_KI270519v1 2326 1.68% 2
chrUn_KI270742v1 927 0.50% 2
chrUn_KI270744v1 7116 4.22% 7
chrUn_KI270751v1 1270 0.84% 2
chrUn_KI270753v1 3372 5.36% 3
chrUn_KI270755v1 803 2.19% 1
chrX 4979468 3.19% 5199
chrY 5005 0.01% 9
3306 contigs with no values (121825197 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 202747 250 44153 1240.03 741
global segment-length histogram

Files

Filename Size md5
ENCFF825GRX.bed.gz 4.3 MB 59ef7e050cf99bda1e3d7d73f6157cfb
ENCFF825GRX.tabix.bed.gz 2.01 MB 8b567e88e0304ef80337131951a59e34
ENCFF825GRX.tabix.bed.gz.tbi 419.81 KB df8d8a4fd850d7eb15354b063d25a288
genomic_resource.yaml 3.12 KB 744289eb484fa6da53440b29403eed0d
statistics/