Resource

Id Histone_ChIP-seq/ENCSR450AORcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR450AOR [biosample_summary="Homo sapiens spleen tissue male adult (26 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR450AOR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male adult (26 years)
  • date_created: 2020-05-01T03:06:45.357880+00:00
  • date_released: 2020-09-03
  • doi: 10.17989/ENCSR450AOR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (26 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR450AOR float

Histone_ChIP-seq_ENCSR450AOR
Histone_ChIP-seq ENCSR450AOR [biosample_summary="Homo sapiens spleen tissue male adult (26 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR450AOR [1.58, 23.8]
n
56,487,886
mean
6.8
sd
4.28

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 564878861.76% 50639
chr1 5894162 2.37% 5622
chr2 3841337 1.59% 3410
chr3 1923315 0.97% 1730
chr4 2125787 1.12% 1671
chr5 2902027 1.60% 2444
chr6 2938243 1.72% 2484
chr7 2656315 1.67% 2168
chr8 2349622 1.62% 2132
chr9 2628139 1.90% 2313
chr10 2993758 2.24% 2737
chr11 2992438 2.22% 2872
chr12 2723842 2.04% 2513
chr13 1213956 1.06% 1081
chr14 1684913 1.57% 1502
chr15 1857415 1.82% 1825
chr16 2298265 2.54% 2186
chr17 3519163 4.23% 2932
chr18 1000643 1.24% 1014
chr19 3524595 6.01% 2879
chr20 2515092 3.90% 2317
chr21 610081 1.31% 614
chr22 1798364 3.54% 1774
chrX 486475 0.31% 409
chrY 9939 0.02% 10
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50639 200 41284 1115.5 657
global segment-length histogram

Files

Filename Size md5
ENCFF836VHT.bed.gz 974.24 KB 4170549b65f036960f841c6db7468f1d
ENCFF836VHT.tabix.bed.gz 496.44 KB 317d8f3c51da224e924c4921f8985ef1
ENCFF836VHT.tabix.bed.gz.tbi 161.43 KB 6752cee489e832aad94b9f02a5c89973
genomic_resource.yaml 1.7 KB 35db3ccb2a00ed002786580d5c48e3e2
statistics/