Resource

Id Histone_ChIP-seq/ENCSR448TUFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR448TUF [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K14ac"]
Description
Labels
  • accession: ENCSR448TUF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000134/
  • biosample_summary: Homo sapiens mesenchymal stem cell originated from H1
  • date_created: 2015-10-01T07:16:32.579425+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR448TUF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K14ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR448TUF float

Histone_ChIP-seq_ENCSR448TUF
Histone_ChIP-seq ENCSR448TUF [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K14ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR448TUF [2.02, 10.2]
n
1,846,665
mean
4.43
sd
0.992

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 18466650.06% 5694
chr1 152342 0.06% 468
chr2 141730 0.06% 463
chr3 113417 0.06% 372
chr4 88429 0.05% 298
chr5 108699 0.06% 342
chr6 101775 0.06% 332
chr7 93992 0.06% 288
chr8 72513 0.05% 230
chr9 85017 0.06% 268
chr10 96107 0.07% 297
chr11 91395 0.07% 280
chr12 100745 0.08% 288
chr13 47317 0.04% 154
chr14 56403 0.05% 170
chr15 66243 0.06% 199
chr16 72607 0.08% 204
chr17 112317 0.13% 318
chr18 38228 0.05% 127
chr19 96467 0.16% 264
chr20 50069 0.08% 148
chr21 21728 0.05% 68
chr22 31049 0.06% 89
chrX 7901 0.01% 26
chrY 175 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5694 160 1568 324.32 280
global segment-length histogram

Files

Filename Size md5
ENCFF350KDZ.bed.gz 106.65 KB ae8889e258fef21c98ea5d7a54ab61cc
ENCFF350KDZ.tabix.bed.gz 57.35 KB e78f873a96edd2a128bc057b21731981
ENCFF350KDZ.tabix.bed.gz.tbi 52.89 KB e898e2bafb334170ae92a6e050dbd14e
genomic_resource.yaml 1.71 KB a1b0098538df12506b5a902e671a740f
statistics/