Resource

Id Histone_ChIP-seq/ENCSR447OHFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR447OHF [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR447OHF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (61 years)
  • date_created: 2015-09-15T19:52:28.995443+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR447OHF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR447OHF float

Histone_ChIP-seq_ENCSR447OHF
Histone_ChIP-seq ENCSR447OHF [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR447OHF [1.73, 113]
n
67,154,415
mean
19.9
sd
16.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 671544152.09% 67638
chr1 7032971 2.82% 6765
chr2 5079466 2.10% 5263
chr3 3907688 1.97% 4166
chr4 2677866 1.41% 2778
chr5 3228801 1.78% 3278
chr6 3864779 2.26% 3965
chr7 2993048 1.88% 3055
chr8 2460913 1.70% 2657
chr9 3032510 2.19% 3066
chr10 3201332 2.39% 3247
chr11 3704750 2.74% 3548
chr12 3405539 2.56% 3335
chr13 1375225 1.20% 1391
chr14 2430263 2.27% 2406
chr15 2354298 2.31% 2361
chr16 2561467 2.84% 2580
chr17 3883110 4.66% 3632
chr18 1205927 1.50% 1294
chr19 2971310 5.07% 2829
chr20 1901468 2.95% 1962
chr21 934675 2.00% 933
chr22 1650498 3.25% 1606
chrM 2067 12.48% 4
chrX 1293713 0.83% 1516
chrY 731 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67638 180 18325 992.85 661
global segment-length histogram

Files

Filename Size md5
ENCFF494RDD.bed.gz 1.6 MB 7c22864f9c9f58fdf62a5a23055fa3ef
ENCFF494RDD.tabix.bed.gz 732.67 KB 653e6191dfdef1ccbf0809e315be5cf4
ENCFF494RDD.tabix.bed.gz.tbi 223.72 KB 1d425b1466dcf23b5916eab27100e322
genomic_resource.yaml 2.01 KB 96bc332314df62525f48b64ee36e4166
statistics/