Resource

Id Histone_ChIP-seq/ENCSR447GWQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR447GWQ [biosample_summary="Homo sapiens stomach tissue female embryo (96 days)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR447GWQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue female embryo (96 days)
  • date_created: 2015-09-16T21:42:21.567360+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR447GWQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (96 days)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR447GWQ float

Histone_ChIP-seq_ENCSR447GWQ
Histone_ChIP-seq ENCSR447GWQ [biosample_summary="Homo sapiens stomach tissue female embryo (96 days)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR447GWQ [1.79, 36.8]
n
68,031,660
mean
6.6
sd
3.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 680316602.11% 125023
chr1 4071411 1.64% 7935
chr2 4300650 1.78% 8430
chr3 3200697 1.61% 6305
chr4 3574492 1.88% 6700
chr5 3484772 1.92% 6657
chr6 2951862 1.73% 5849
chr7 4361691 2.74% 7557
chr8 3305681 2.28% 5750
chr9 2388214 1.73% 4484
chr10 3013720 2.25% 5952
chr11 2692542 1.99% 5162
chr12 2961638 2.22% 5312
chr13 1880782 1.64% 3483
chr14 2194560 2.05% 3953
chr15 1924602 1.89% 3488
chr16 2374469 2.63% 4110
chr17 1823687 2.19% 3266
chr18 1503781 1.87% 2966
chr19 5389516 9.19% 8516
chr20 1773066 2.75% 3346
chr21 1235643 2.65% 2193
chr22 1242185 2.44% 2353
chrX 6353653 4.07% 11187
chrY 28346 0.05% 69
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 125023 185 96968 544.15 410
global segment-length histogram

Files

Filename Size md5
ENCFF854LRF.bed.gz 2.22 MB bbc095b944004d37630829c62c8f5404
ENCFF854LRF.tabix.bed.gz 1.14 MB 57f1bf461e1d0dd889b17530df698a92
ENCFF854LRF.tabix.bed.gz.tbi 433.98 KB a6c972a626e413aa4ef55e9a13b5d8b1
genomic_resource.yaml 1.71 KB bbfd971f168a00d14a62aaf13955fefe
statistics/