Resource

Id Histone_ChIP-seq/ENCSR442JTAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR442JTA [biosample_summary="Homo sapiens heart left ventricle tissue male child (3 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR442JTA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male child (3 years)
  • date_created: 2015-10-01T07:17:29.403733+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR442JTA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR442JTA float

Histone_ChIP-seq_ENCSR442JTA
Histone_ChIP-seq ENCSR442JTA [biosample_summary="Homo sapiens heart left ventricle tissue male child (3 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR442JTA [1.75, 14.7]
n
6,757,975
mean
4.53
sd
1.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 67579750.21% 22413
chr1 427181 0.17% 1449
chr2 509829 0.21% 1782
chr3 410979 0.21% 1410
chr4 440269 0.23% 1571
chr5 474147 0.26% 1608
chr6 360819 0.21% 1260
chr7 404060 0.25% 1353
chr8 367453 0.25% 1276
chr9 277862 0.20% 927
chr10 319417 0.24% 1094
chr11 266603 0.20% 940
chr12 334065 0.25% 1087
chr13 203852 0.18% 732
chr14 228285 0.21% 817
chr15 189408 0.19% 596
chr16 262478 0.29% 819
chr17 120598 0.14% 398
chr18 174302 0.22% 611
chr19 605963 1.03% 1401
chr20 157359 0.24% 523
chr21 107067 0.23% 353
chr22 43299 0.09% 144
chrM 4611 27.83% 9
chrX 57696 0.04% 219
chrY 10373 0.02% 34
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22413 165 4529 301.52 262
global segment-length histogram

Files

Filename Size md5
ENCFF495QNH.bed.gz 388.1 KB 9d34fdb6c957742478d01c1fdfe699ff
ENCFF495QNH.tabix.bed.gz 206.14 KB 65427f1b51cfbd8b3edb74514aa83c1e
ENCFF495QNH.tabix.bed.gz.tbi 154.92 KB 03069633ab00ce722b26d8d5779b01bc
genomic_resource.yaml 2.0 KB e51c7a36ad35850f49c2df0175d39f6c
statistics/