Resource

Id Histone_ChIP-seq/ENCSR442BHPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR442BHP [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (28 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR442BHP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (28 years)
  • date_created: 2015-09-15T20:26:52.990913+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR442BHP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (28 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR442BHP float

Histone_ChIP-seq_ENCSR442BHP
Histone_ChIP-seq ENCSR442BHP [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (28 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR442BHP [1.7, 23.1]
n
66,065,351
mean
5.82
sd
2.68

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 660653512.05% 70061
chr1 6852290 2.75% 7144
chr2 5055608 2.09% 5505
chr3 3078551 1.55% 3448
chr4 2503652 1.32% 2752
chr5 3922833 2.16% 4140
chr6 4097145 2.40% 4529
chr7 3068844 1.93% 3297
chr8 2889006 1.99% 3166
chr9 2878286 2.08% 3041
chr10 3635671 2.72% 3902
chr11 3922513 2.90% 4121
chr12 3028748 2.27% 3208
chr13 1685031 1.47% 1902
chr14 2187649 2.04% 2381
chr15 2502995 2.45% 2771
chr16 2048822 2.27% 2121
chr17 3197662 3.84% 2931
chr17_GL000205v2_random 55870 30.10% 22
chr18 1337343 1.66% 1573
chr19 2851779 4.87% 2687
chr20 2487508 3.86% 2568
chr21 609750 1.31% 650
chr22 1387348 2.73% 1370
chr22_KI270733v1_random 3053 1.70% 3
chrUn_GL000195v1 1429 0.78% 2
chrUn_GL000219v1 10774 6.01% 11
chrUn_GL000220v1 479 0.30% 1
chrUn_GL000224v1 4306 2.40% 4
chrUn_KI270438v1 642 0.57% 1
chrUn_KI270744v1 2776 1.65% 3
chrX 733324 0.47% 775
chrY 23664 0.04% 32
3334 contigs with no values (127727156 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70061 300 21573 942.97 694
global segment-length histogram

Files

Filename Size md5
ENCFF311DHJ.bed.gz 1.48 MB ce768f872d41e2df5d41e49bcb758ce9
ENCFF311DHJ.tabix.bed.gz 727.37 KB 884e10f0662c6913b909c916f90a6c8f
ENCFF311DHJ.tabix.bed.gz.tbi 230.28 KB ebed5179c53a5e4528dc8589d801633c
genomic_resource.yaml 2.05 KB 529915b03f1a76a3696aedb092c1a0c9
statistics/