Resource

Id Histone_ChIP-seq/ENCSR441UHOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR441UHO [biosample_summary="Homo sapiens H1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR441UHO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:17:26.300931+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR441UHO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR441UHO float

Histone_ChIP-seq_ENCSR441UHO

Histone_ChIP-seq ENCSR441UHO [biosample_summary="Homo sapiens H1" and target="H3K9ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR441UHO [1.81, 64]
n
15,004,161
mean
9.68
sd
7.04

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 150041610.47% 37110
chr1 1528738 0.61% 3704
chr1_KI270713v1_random 508 1.25% 3
chr1_KI270714v1_random 130 0.31% 1
chr2 1027508 0.42% 2497
chr3 891303 0.45% 2146
chr4 601694 0.32% 1468
chr4_GL000008v2_random 622 0.30% 2
chr5 737973 0.41% 1774
chr6 982684 0.58% 2300
chr7 684359 0.43% 1745
chr8 527730 0.36% 1356
chr9 561218 0.41% 1448
chr9_KI270718v1_random 170 0.45% 1
chr10 584425 0.44% 1492
chr11 809253 0.60% 1946
chr12 827205 0.62% 2000
chr13 309385 0.27% 805
chr14 532024 0.50% 1283
chr15 469487 0.46% 1186
chr16 583886 0.65% 1522
chr17 824709 0.99% 2004
chr17_KI270729v1_random 244 0.09% 1
chr18 238401 0.30% 648
chr19 1000414 1.71% 2470
chr20 390177 0.61% 1009
chr21 122864 0.26% 333
chr22 312312 0.61% 842
chr22_KI270733v1_random 1697 0.94% 6
chr22_KI270736v1_random 359 0.20% 1
chrUn_KI270438v1 215 0.19% 1
chrX 431942 0.28% 1081
chrY 20525 0.04% 35
3334 contigs with no values (127991824 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37110 125 5345 404.32 279
global segment-length histogram

Files

Filename Size md5
ENCFF806NNI.bed.gz 820.99 KB bf298c4a9119d9b1537adba17f68f092
ENCFF806NNI.tabix.bed.gz 385.0 KB 7045365004246a5dcf3a2b8e81edd92b
ENCFF806NNI.tabix.bed.gz.tbi 159.22 KB 4720dfcd94cbfecde3b254ffa0d90778
genomic_resource.yaml 2.34 KB b6c0fd219a6480c27e58e5a565b5672e
statistics/