Resource

Id Histone_ChIP-seq/ENCSR440UCRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR440UCR [biosample_summary="Homo sapiens ovary tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR440UCR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (53 years)
  • date_created: 2017-07-28T10:06:21.915666+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR440UCR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR440UCR float

Histone_ChIP-seq_ENCSR440UCR
Histone_ChIP-seq ENCSR440UCR [biosample_summary="Homo sapiens ovary tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR440UCR [1.37, 5.25]
n
961,614
mean
2.94
sd
0.538

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 9616140.03% 1739
chr1 20952 0.01% 52
chr2 33573 0.01% 79
chr3 39853 0.02% 81
chr4 47640 0.03% 83
chr5 61148 0.03% 123
chr6 19767 0.01% 50
chr7 36961 0.02% 73
chr8 20572 0.01% 46
chr9 35190 0.03% 66
chr10 25391 0.02% 57
chr11 15004 0.01% 34
chr12 68039 0.05% 114
chr13 5656 <0.01% 14
chr14 11203 0.01% 28
chr15 38803 0.04% 64
chr16 29756 0.03% 54
chr17 13755 0.02% 25
chr18 10319 0.01% 25
chr19 397707 0.68% 602
chr20 6777 0.01% 13
chr21 10358 0.02% 23
chr22 4744 0.01% 11
chrX 7596 <0.01% 20
chrY 850 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1739 245 3462 552.97 441
global segment-length histogram

Files

Filename Size md5
ENCFF322VXD.bed.gz 34.32 KB 728dc4fb6707dedfe7dc64026b7d8db0
ENCFF322VXD.tabix.bed.gz 18.44 KB e285a41d8529e7d8741a2a006f5a530a
ENCFF322VXD.tabix.bed.gz.tbi 15.5 KB c414840e23d98c482d5b14bfbd706d42
genomic_resource.yaml 1.49 KB ede0bc4ebc8963568373013ae006a92f
statistics/