Resource

Id Histone_ChIP-seq/ENCSR440PMPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR440PMP [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR440PMP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (37 years)
  • date_created: 2019-04-27T23:24:40.254895+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR440PMP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR440PMP float

Histone_ChIP-seq_ENCSR440PMP
Histone_ChIP-seq ENCSR440PMP [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR440PMP [1.73, 58.2]
n
98,871,348
mean
12.3
sd
9.43

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 988713483.07% 63850
chr1 10067088 4.04% 6297
chr2 7660589 3.16% 5160
chr3 5866139 2.96% 3924
chr4 3754563 1.97% 2616
chr5 4645430 2.56% 3058
chr6 5237906 3.07% 3554
chr7 4367109 2.74% 2941
chr8 3701698 2.55% 2480
chr9 4788286 3.46% 3062
chr10 5099943 3.81% 3348
chr11 5474044 4.05% 3332
chr12 4991481 3.75% 3126
chr13 2022221 1.77% 1411
chr14 3594128 3.36% 2205
chr15 3314765 3.25% 2176
chr16 3876762 4.29% 2516
chr17 5763215 6.92% 3351
chr18 1757631 2.19% 1229
chr19 4434376 7.56% 2584
chr20 2800911 4.35% 1785
chr21 1235953 2.65% 816
chr22 2498007 4.92% 1482
chrX 1863000 1.19% 1354
chrY 56103 0.10% 43
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63850 230 48879 1548.49 1092
global segment-length histogram

Files

Filename Size md5
ENCFF310DII.bed.gz 1.61 MB 84c0246ef1f8a8e40db4e2c995b07d0a
ENCFF310DII.tabix.bed.gz 713.3 KB dfd8ac5f91b8616d42fc1d7be2f25de1
ENCFF310DII.tabix.bed.gz.tbi 230.47 KB ba8c85bc48fcfc10966ac170afc75b76
genomic_resource.yaml 1.72 KB 74aa8edb5eb79102dd0b7c1b8ddc25a0
statistics/