Resource

Id Histone_ChIP-seq/ENCSR438KQUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR438KQU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR438KQU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)
  • date_created: 2021-04-30T04:18:02.540988+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR438KQU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (83 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR438KQU float

Histone_ChIP-seq_ENCSR438KQU
Histone_ChIP-seq ENCSR438KQU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR438KQU [1.86, 37.9]
n
53,944,130
mean
7.99
sd
4.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 539441301.68% 49704
chr1 5620014 2.26% 5061
chr2 3860143 1.59% 3464
chr3 3140325 1.58% 2932
chr4 2297426 1.21% 2175
chr5 2728124 1.50% 2562
chr6 2901583 1.70% 2635
chr7 2422516 1.52% 2382
chr8 1994751 1.37% 1927
chr9 2740041 1.98% 2462
chr10 2871443 2.15% 2485
chr11 3448700 2.55% 3035
chr12 2496419 1.87% 2398
chr13 1311696 1.15% 1209
chr14 1972544 1.84% 1700
chr15 1970908 1.93% 1799
chr16 1803028 2.00% 1646
chr17 3088609 3.71% 2787
chr18 1044912 1.30% 992
chr19 2247357 3.83% 2224
chr20 1476532 2.29% 1336
chr21 565662 1.21% 515
chr22 1183399 2.33% 1104
chrX 757998 0.49% 874
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 49704 175 27541 1085.31 691
global segment-length histogram

Files

Filename Size md5
ENCFF595CLG.bed.gz 1.03 MB dca3a4ce044414618662ea3894028f6f
ENCFF595CLG.tabix.bed.gz 511.19 KB 26538f0cb7e778cd569cfa27b5e6328e
ENCFF595CLG.tabix.bed.gz.tbi 177.2 KB d90e08da9836dd411d4cc931daf1d34b
genomic_resource.yaml 1.57 KB 6086e9f7daf0b62a67904b51c4406ce2
statistics/