Resource

Id Histone_ChIP-seq/ENCSR436JNBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR436JNB [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR436JNB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (61 years)
  • date_created: 2021-01-28T22:01:55.306469+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR436JNB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR436JNB float

Histone_ChIP-seq_ENCSR436JNB
Histone_ChIP-seq ENCSR436JNB [biosample_summary="Homo sapiens spleen tissue female adult (61 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR436JNB [1.75, 72.4]
n
87,427,842
mean
13.5
sd
11.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 874278422.72% 61382
chr1 8714581 3.50% 6094
chr2 6632990 2.74% 4794
chr3 5255250 2.65% 3860
chr4 3164537 1.66% 2407
chr5 4093912 2.26% 2901
chr6 4745910 2.78% 3379
chr7 3898693 2.45% 2935
chr8 3300424 2.27% 2414
chr9 3780201 2.73% 2661
chr10 4245822 3.17% 2927
chr11 4799643 3.55% 3149
chr12 4624846 3.47% 3185
chr13 1765253 1.54% 1332
chr14 3241065 3.03% 2269
chr15 3022640 2.96% 2035
chr16 3242912 3.59% 2276
chr17 5252273 6.31% 3469
chr18 1512758 1.88% 1138
chr19 4645417 7.92% 2900
chr20 2489579 3.86% 1742
chr21 1090677 2.33% 785
chr22 2224459 4.38% 1439
chrX 1684000 1.08% 1291
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61382 205 31635 1424.32 1010
global segment-length histogram

Files

Filename Size md5
ENCFF927GAF.bed.gz 1.35 MB 89035df6939b43481cd9e00900168878
ENCFF927GAF.tabix.bed.gz 649.64 KB 2f48d8a2bfc831d72817f43ca53a33d5
ENCFF927GAF.tabix.bed.gz.tbi 220.4 KB 5e838e8cbdae7c20d450245e25bea8e3
genomic_resource.yaml 1.49 KB af3cd5a7d5abd634d5a9a3fe801ed38d
statistics/