Resource

Id Histone_ChIP-seq/ENCSR431FZZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR431FZZ [biosample_summary="Homo sapiens layer of hippocampus tissue female adult (75 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR431FZZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002305/
  • biosample_summary: Homo sapiens layer of hippocampus tissue female adult (75 years)
  • date_created: 2015-09-15T19:49:18.734085+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR431FZZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR431FZZ float

Histone_ChIP-seq_ENCSR431FZZ
Histone_ChIP-seq ENCSR431FZZ [biosample_summary="Homo sapiens layer of hippocampus tissue female adult (75 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR431FZZ [1.82, 14.1]
n
7,980,437
mean
4.63
sd
1.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 79804370.25% 22073
chr1 496592 0.20% 1433
chr2 536345 0.22% 1579
chr3 407056 0.21% 1222
chr4 456884 0.24% 1282
chr5 553137 0.30% 1471
chr6 330721 0.19% 998
chr7 458914 0.29% 1299
chr8 331654 0.23% 980
chr9 304037 0.22% 845
chr10 326286 0.24% 935
chr11 307805 0.23% 917
chr12 446142 0.33% 1176
chr13 172891 0.15% 532
chr14 209690 0.20% 618
chr15 194553 0.19% 474
chr16 250356 0.28% 665
chr17 174160 0.21% 488
chr18 147312 0.18% 439
chr19 1058652 1.81% 2115
chr20 153322 0.24% 457
chr21 111008 0.24% 319
chr22 93110 0.18% 271
chrX 458901 0.29% 1554
chrY 909 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22073 145 10656 361.55 296
global segment-length histogram

Files

Filename Size md5
ENCFF398NVA.bed.gz 390.01 KB 01ce5756d096e4dcac7dcf9543db9290
ENCFF398NVA.tabix.bed.gz 206.69 KB a086c3c631f4b4926f2cb588a05b2498
ENCFF398NVA.tabix.bed.gz.tbi 140.32 KB d134ae31bbd23e1a9db21f6797611054
genomic_resource.yaml 1.54 KB 3f404b8d0bb254036bf9cd24ff298c5e
statistics/