Resource

Id Histone_ChIP-seq/ENCSR429MNFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR429MNF [biosample_summary="Homo sapiens lung tissue male child (3 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR429MNF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue male child (3 years)
  • date_created: 2015-10-01T07:16:01.950815+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR429MNF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR429MNF float

Histone_ChIP-seq_ENCSR429MNF
Histone_ChIP-seq ENCSR429MNF [biosample_summary="Homo sapiens lung tissue male child (3 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR429MNF [1.77, 21.5]
n
37,984,053
mean
5.17
sd
1.68

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 379840531.18% 84593
chr1 4025333 1.62% 8749
chr1_KI270711v1_random 383 0.91% 1
chr2 3174288 1.31% 7216
chr3 2655923 1.34% 6016
chr4 1580265 0.83% 3828
chr5 2001630 1.10% 4665
chr6 1888026 1.11% 4374
chr7 1645104 1.03% 3773
chr8 1347460 0.93% 3227
chr9 1643747 1.19% 3558
chr10 1759531 1.32% 3994
chr11 1898068 1.41% 4100
chr12 2190448 1.64% 4764
chr13 886144 0.77% 2127
chr14 1363211 1.27% 3089
chr15 1492644 1.46% 3322
chr16 1392625 1.54% 2959
chr17 1837061 2.21% 3920
chr18 665747 0.83% 1618
chr19 1934836 3.30% 3518
chr20 1080303 1.68% 2317
chr21 367633 0.79% 875
chr22 762946 1.50% 1618
chrUn_GL000219v1 469 0.26% 2
chrX 371924 0.24% 915
chrY 18304 0.03% 48
3340 contigs with no values (128855677 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 84593 150 6663 449.02 374
global segment-length histogram

Files

Filename Size md5
ENCFF432FEB.bed.gz 1.56 MB fcad2a7b2dbcda42f8060e2fda6f8235
ENCFF432FEB.tabix.bed.gz 799.91 KB e5d5b85d1efc6a69b9b437c62dcb7169
ENCFF432FEB.tabix.bed.gz.tbi 171.84 KB f75c45fcabdd5783e60f90a089fc554c
genomic_resource.yaml 1.96 KB 92bdb492209e9522a135cb614e09202c
statistics/