Resource

Id Histone_ChIP-seq/ENCSR426CZMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR426CZM [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR426CZM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence
  • date_created: 2015-09-15T20:27:17.078841+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR426CZM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (17 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR426CZM float

Histone_ChIP-seq_ENCSR426CZM
Histone_ChIP-seq ENCSR426CZM [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR426CZM [1.44, 16.1]
n
202,333,367
mean
5.19
sd
1.98

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2023333676.29% 182453
chr1 19797072 7.95% 17768
chr2 15508514 6.40% 16076
chr3 12149457 6.13% 12222
chr4 8160545 4.29% 8837
chr5 9809465 5.40% 9971
chr6 8434019 4.94% 8828
chr7 9989279 6.27% 9262
chr8 7055599 4.86% 7269
chr9 8648003 6.25% 7428
chr10 8673365 6.48% 8438
chr11 10380561 7.68% 8820
chr12 10495283 7.87% 9054
chr13 4288716 3.75% 4760
chr14 7197976 6.72% 6962
chr15 7513734 7.37% 7278
chr16 8976598 9.94% 6043
chr17 11635104 13.97% 8683
chr18 3684663 4.58% 4116
chr19 13213774 22.54% 6934
chr20 6238478 9.68% 4781
chr21 2296324 4.92% 2008
chr22 5446072 10.72% 3514
chrX 2740766 1.76% 3401
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 182453 205 44840 1108.96 649
global segment-length histogram

Files

Filename Size md5
ENCFF959BTD.bed.gz 3.8 MB 97e2c8e5090651d983e8b47fd1e8df16
ENCFF959BTD.tabix.bed.gz 1.82 MB 2441e82e3baedb68da5d21909ed5c2a6
ENCFF959BTD.tabix.bed.gz.tbi 205.41 KB c2bb808094534a02dd43a3b0a09d51a8
genomic_resource.yaml 1.61 KB 50f70fddf45118b5d9f3d8300fd4ad23
statistics/