Resource

Id Histone_ChIP-seq/ENCSR424IJMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR424IJM [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR424IJM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:32.073152+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR424IJM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR424IJM float

Histone_ChIP-seq_ENCSR424IJM
Histone_ChIP-seq ENCSR424IJM [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR424IJM [1.66, 46.6]
n
101,747,566
mean
8.68
sd
5.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1017475663.16% 71340
chr1 10194678 4.09% 6958
chr2 7572628 3.13% 5478
chr3 6169504 3.11% 4394
chr4 4393288 2.31% 3124
chr5 5694256 3.14% 4063
chr6 5437748 3.18% 3839
chr7 4769406 2.99% 3563
chr8 4131515 2.85% 3009
chr9 4952205 3.58% 3296
chr10 5284986 3.95% 3512
chr11 6243649 4.62% 4137
chr12 5119770 3.84% 3667
chr13 2528369 2.21% 1815
chr14 3477226 3.25% 2392
chr15 3565263 3.50% 2464
chr16 3340268 3.70% 2383
chr17 5372739 6.45% 3618
chr18 2027060 2.52% 1476
chr19 3801302 6.48% 2711
chr20 2846221 4.42% 1944
chr21 1081752 2.32% 752
chr22 2256640 4.44% 1517
chrX 1487093 0.95% 1228
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71340 210 64482 1426.23 934
global segment-length histogram

Files

Filename Size md5
ENCFF045ADI.bed.gz 1.58 MB c4fab56a809702a6863ed611046798a4
ENCFF045ADI.tabix.bed.gz 754.14 KB c5728d7664b15c9d9267b91a21c3f667
ENCFF045ADI.tabix.bed.gz.tbi 232.83 KB 70987df51660e6522fbb2d00380aed4c
genomic_resource.yaml 1.74 KB 1115f2aa81e2e3d9f17da8f2c7b9f21a
statistics/