Resource

Id Histone_ChIP-seq/ENCSR423OODcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR423OOD [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR423OOD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (61 years)
  • date_created: 2021-01-28T22:01:57.111854+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR423OOD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR423OOD float

Histone_ChIP-seq_ENCSR423OOD
Histone_ChIP-seq ENCSR423OOD [biosample_summary="Homo sapiens pancreas tissue female adult (61 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR423OOD [1.67, 8.3]
n
20,274,376
mean
3.8
sd
0.851

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 202743760.63% 27931
chr1 2202826 0.88% 2993
chr2 1413290 0.58% 2003
chr3 1154634 0.58% 1634
chr4 630598 0.33% 982
chr5 949113 0.52% 1378
chr6 843548 0.49% 1237
chr7 846387 0.53% 1219
chr8 574773 0.40% 876
chr9 871715 0.63% 1177
chr10 834421 0.62% 1216
chr11 1157029 0.86% 1553
chr12 1247383 0.94% 1644
chr13 322639 0.28% 513
chr14 719509 0.67% 1044
chr15 721673 0.71% 1053
chr16 1020581 1.13% 1332
chr17 1353514 1.63% 1770
chr18 218598 0.27% 369
chr19 1579837 2.70% 1782
chr20 621228 0.96% 846
chr21 223335 0.48% 335
chr22 637701 1.25% 779
chrX 130044 0.08% 196
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27931 170 11956 725.87 588
global segment-length histogram

Files

Filename Size md5
ENCFF397ZXX.bed.gz 537.68 KB 7e3ca1bef71e7bd31ec7e48284f8838a
ENCFF397ZXX.tabix.bed.gz 279.09 KB 26111a1bf490163becc1d25fd983c9e7
ENCFF397ZXX.tabix.bed.gz.tbi 96.16 KB fbe84266b2f40fba679116bbc4147f50
genomic_resource.yaml 1.5 KB b1b9131a843d71fce0972329b2ada0a0
statistics/