Resource
| Id | Histone_ChIP-seq/ENCSR421YVG |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR421YVG [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"] |
| Description |
status: released biological_replicates: Rep 1 summary: 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR421YVG | float |
Histone_ChIP-seq_ENCSR421YVG |
Histone_ChIP-seq ENCSR421YVG [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H4K20me1"]
|
 |
[1.22, 27.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 119689489 | 3.72% | 120960 |
| chr1 | 11021125 | 4.43% | 11462 |
| chr1_KI270712v1_random | 1938 | 1.10% | 4 |
| chr1_KI270713v1_random | 887 | 2.18% | 2 |
| chr2 | 8639225 | 3.57% | 8672 |
| chr3 | 6654208 | 3.36% | 7027 |
| chr4 | 4180750 | 2.20% | 4519 |
| chr4_GL000008v2_random | 270 | 0.13% | 1 |
| chr5 | 6016397 | 3.31% | 5981 |
| chr6 | 5665023 | 3.32% | 6033 |
| chr7 | 6386815 | 4.01% | 7015 |
| chr8 | 6044438 | 4.16% | 5500 |
| chr9 | 5408097 | 3.91% | 5157 |
| chr10 | 6080710 | 4.54% | 6465 |
| chr11 | 5586486 | 4.14% | 5673 |
| chr12 | 5590169 | 4.19% | 5491 |
| chr13 | 2382360 | 2.08% | 2483 |
| chr14 | 3672700 | 3.43% | 3869 |
| chr14_GL000194v1_random | 360 | 0.19% | 1 |
| chr15 | 3511498 | 3.44% | 3873 |
| chr16 | 5847134 | 6.47% | 5315 |
| chr17 | 7128442 | 8.56% | 7032 |
| chr18 | 2190421 | 2.73% | 2421 |
| chr19 | 5885891 | 10.04% | 4963 |
| chr20 | 3788013 | 5.88% | 3393 |
| chr21 | 1570051 | 3.36% | 1491 |
| chr22 | 3854417 | 7.58% | 3453 |
| chr22_KI270733v1_random | 588 | 0.33% | 2 |
| chrUn_GL000219v1 | 4605 | 2.57% | 6 |
| chrUn_GL000220v1 | 3055 | 1.89% | 6 |
| chrUn_KI270411v1 | 1672 | 63.19% | 2 |
| chrUn_KI270422v1 | 381 | 26.37% | 1 |
| chrUn_KI270438v1 | 1631 | 1.45% | 4 |
| chrUn_KI270465v1 | 250 | 14.09% | 1 |
| chrUn_KI270544v1 | 872 | 72.55% | 2 |
| chrX | 2566532 | 1.64% | 3636 |
| chrY | 2078 | <0.01% | 4 |
| 3330 contigs with no values (127818775 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 120960 | 250 | 165072 | 989.5 | 458 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF495HDE.bed.gz | 2.46 MB | 5b590b1800bd68934cf17e6680f61961 |
| ENCFF495HDE.tabix.bed.gz | 1.18 MB | 349d738b15b6a63a0236673a83d479c7 |
| ENCFF495HDE.tabix.bed.gz.tbi | 172.85 KB | d9e033f0ef34c6abc14e8f30e89e98a5 |
| genomic_resource.yaml | 3.12 KB | 3aa70ccf8251b6d1a475d326e3d0281c |
| statistics/ |