Resource

Id Histone_ChIP-seq/ENCSR420GIYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR420GIY [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR420GIY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female child (16 years)
  • date_created: 2021-01-28T22:02:14.077930+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR420GIY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR420GIY float

Histone_ChIP-seq_ENCSR420GIY
Histone_ChIP-seq ENCSR420GIY [biosample_summary="Homo sapiens pancreas tissue female child (16 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR420GIY [1.56, 5.27]
n
1,105,627
mean
3.28
sd
0.598

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 11056270.03% 2190
chr1 51393 0.02% 113
chr2 52743 0.02% 120
chr3 41132 0.02% 95
chr4 68658 0.04% 150
chr5 80395 0.04% 166
chr6 36775 0.02% 89
chr7 50352 0.03% 106
chr8 53032 0.04% 112
chr9 50491 0.04% 100
chr10 38127 0.03% 80
chr11 30330 0.02% 71
chr12 59455 0.04% 106
chr13 26019 0.02% 65
chr14 18195 0.02% 39
chr15 27369 0.03% 51
chr16 41002 0.05% 70
chr17 12621 0.02% 27
chr18 22564 0.03% 54
chr19 263318 0.45% 389
chr20 13911 0.02% 29
chr21 13209 0.03% 27
chr22 3965 0.01% 10
chrX 50571 0.03% 121
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2190 180 2729 504.85 429
global segment-length histogram

Files

Filename Size md5
ENCFF795HSX.bed.gz 43.97 KB b04229dce66011029435e0fbc199060a
ENCFF795HSX.tabix.bed.gz 23.29 KB 404436e4281d6334ef66e36ae94bd81d
ENCFF795HSX.tabix.bed.gz.tbi 22.81 KB 372c38ca58aa23a4471d3286ed8a2d4f
genomic_resource.yaml 1.5 KB ddf462099a2b8d87adad12fe1a23d8c3
statistics/