Resource

Id Histone_ChIP-seq/ENCSR420EWOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR420EWO [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR420EWO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (39 years)
  • date_created: 2017-03-22T16:16:54.457488+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR420EWO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (39 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR420EWO float

Histone_ChIP-seq_ENCSR420EWO
Histone_ChIP-seq ENCSR420EWO [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR420EWO [1.97, 11]
n
6,181,099
mean
4.38
sd
0.964

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 61810990.19% 10808
chr1 620798 0.25% 1089
chr2 426907 0.18% 780
chr3 298851 0.15% 565
chr4 132986 0.07% 246
chr5 263577 0.15% 458
chr6 262162 0.15% 489
chr7 237713 0.15% 436
chr8 219446 0.15% 391
chr9 310171 0.22% 529
chr10 292296 0.22% 506
chr11 414041 0.31% 679
chr12 263541 0.20% 460
chr13 88044 0.08% 178
chr14 238669 0.22% 440
chr15 214104 0.21% 378
chr16 355571 0.39% 589
chr17 484629 0.58% 800
chr18 69106 0.09% 137
chr19 443649 0.76% 725
chr20 207313 0.32% 361
chr21 83161 0.18% 148
chr22 240256 0.47% 393
chrX 14108 0.01% 31
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10808 215 3364 571.9 502
global segment-length histogram

Files

Filename Size md5
ENCFF734KLT.bed.gz 185.45 KB 7d8338e063570ae9d8f0766906d13ebc
ENCFF734KLT.tabix.bed.gz 103.36 KB da3e32df94d8b69fef876597781e0625
ENCFF734KLT.tabix.bed.gz.tbi 73.46 KB 6aece481df9aeaad0dae5593a617ff33
genomic_resource.yaml 2.05 KB 1410c14e2bcddd16266dbb02b5f6cfa5
statistics/