Resource

Id Histone_ChIP-seq/ENCSR416ZMWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR416ZMW [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR416ZMW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (37 years)
  • date_created: 2019-04-27T23:17:33.080573+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR416ZMW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR416ZMW float

Histone_ChIP-seq_ENCSR416ZMW
Histone_ChIP-seq ENCSR416ZMW [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR416ZMW [1.3, 9.81]
n
86,757,863
mean
3.75
sd
1.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 867578632.70% 78830
chr1 9413263 3.78% 8191
chr1_KI270712v1_random 1857 1.05% 3
chr2 6393442 2.64% 6103
chr3 5026682 2.53% 4747
chr4 2978939 1.57% 3012
chr5 4091677 2.25% 3804
chr6 4433697 2.60% 4370
chr7 3790870 2.38% 3682
chr8 3204393 2.21% 3051
chr9 4049731 2.93% 3603
chr10 4340466 3.24% 3959
chr11 5157073 3.82% 4475
chr12 4245181 3.19% 3920
chr13 1613001 1.41% 1572
chr14 3172078 2.96% 2815
chr15 3158795 3.10% 2797
chr16 3775973 4.18% 3295
chr17 5599966 6.73% 4577
chr17_GL000205v2_random 1420 0.77% 1
chr18 1461324 1.82% 1462
chr19 4276841 7.30% 3475
chr20 2705550 4.20% 2401
chr21 975449 2.09% 936
chr22 2448628 4.82% 2057
chrUn_GL000195v1 682 0.37% 1
chrUn_GL000219v1 1852 1.03% 2
chrUn_KI270467v1 769 19.62% 1
chrX 434194 0.28% 511
chrY 4070 0.01% 7
3337 contigs with no values (128349437 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78830 240 20085 1100.57 855
global segment-length histogram

Files

Filename Size md5
ENCFF512XCP.bed.gz 1.79 MB 76a3e18f2b82c970d2a78998c17e9164
ENCFF512XCP.tabix.bed.gz 843.88 KB c1f28c78df14d4dd050b5bfba7450303
ENCFF512XCP.tabix.bed.gz.tbi 242.17 KB 1790ae742d37465b55747c72f3267ab5
genomic_resource.yaml 1.51 KB 102242099702755f848b1db4e4b36948
statistics/