Resource
| Id | Histone_ChIP-seq/ENCSR415ACV |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR415ACV [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR415ACV | float |
Histone_ChIP-seq_ENCSR415ACV |
Histone_ChIP-seq ENCSR415ACV [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
|
 |
[1.15, 62.7] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 61801987 | 1.92% | 60940 |
| chr1 | 6078341 | 2.44% | 5984 |
| chr1_KI270712v1_random | 666 | 0.38% | 2 |
| chr1_KI270713v1_random | 715 | 1.75% | 1 |
| chr2 | 4262595 | 1.76% | 4263 |
| chr3 | 3445699 | 1.74% | 3387 |
| chr3_GL000221v1_random | 510 | 0.33% | 1 |
| chr4 | 2332968 | 1.23% | 2327 |
| chr5 | 2935916 | 1.62% | 2779 |
| chr6 | 3314591 | 1.94% | 3171 |
| chr7 | 2901309 | 1.82% | 2926 |
| chr8 | 2623881 | 1.81% | 2661 |
| chr9 | 2497220 | 1.80% | 2529 |
| chr9_KI270719v1_random | 333 | 0.19% | 1 |
| chr10 | 2841510 | 2.12% | 2807 |
| chr11 | 3217468 | 2.38% | 3083 |
| chr12 | 3294124 | 2.47% | 3190 |
| chr13 | 1200649 | 1.05% | 1174 |
| chr14 | 2032889 | 1.90% | 1923 |
| chr14_GL000009v2_random | 462 | 0.23% | 1 |
| chr14_GL000194v1_random | 825 | 0.43% | 1 |
| chr14_KI270723v1_random | 311 | 0.82% | 1 |
| chr15 | 2111214 | 2.07% | 2082 |
| chr16 | 2587591 | 2.86% | 2703 |
| chr16_KI270728v1_random | 406 | 0.02% | 1 |
| chr17 | 3764559 | 4.52% | 3706 |
| chr17_GL000205v2_random | 13495 | 7.27% | 12 |
| chr18 | 1015254 | 1.26% | 1026 |
| chr19 | 3690971 | 6.30% | 3480 |
| chr20 | 1771967 | 2.75% | 1790 |
| chr21 | 792853 | 1.70% | 813 |
| chr22 | 1454623 | 2.86% | 1601 |
| chr22_KI270731v1_random | 286 | 0.19% | 1 |
| chr22_KI270733v1_random | 2321 | 1.29% | 5 |
| chrUn_GL000195v1 | 2285 | 1.25% | 4 |
| chrUn_GL000219v1 | 4081 | 2.28% | 4 |
| chrUn_GL000220v1 | 252 | 0.16% | 1 |
| chrUn_KI270438v1 | 2387 | 2.12% | 4 |
| chrUn_KI270744v1 | 395 | 0.23% | 1 |
| chrUn_KI270753v1 | 289 | 0.46% | 1 |
| chrX | 1603244 | 1.03% | 1491 |
| chrY | 532 | <0.01% | 2 |
| 3325 contigs with no values (124840069 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 60940 | 250 | 18102 | 1014.14 | 563 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF965XBS.bed.gz | 1.32 MB | 2a5e9da28baa048f768fafcb85ec512a |
| ENCFF965XBS.tabix.bed.gz | 633.72 KB | 1e36e87ef838b235925743cdc3dc1003 |
| ENCFF965XBS.tabix.bed.gz.tbi | 236.09 KB | 15b1ed6400dad141ad39aec0c848dccb |
| genomic_resource.yaml | 3.12 KB | 2ccfe4a3bb88224c14790e8d92f3aa25 |
| statistics/ |