Resource

Id Histone_ChIP-seq/ENCSR413YCIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR413YCI [biosample_summary="Homo sapiens BLaER1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR413YCI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1
  • date_created: 2022-01-27T21:51:13.352436+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR413YCI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR413YCI float

Histone_ChIP-seq_ENCSR413YCI
Histone_ChIP-seq ENCSR413YCI [biosample_summary="Homo sapiens BLaER1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR413YCI [1.16, 44.8]
n
90,251,667
mean
9.07
sd
6.99

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 902516672.81% 93197
chr1 8249749 3.31% 8588
chr1_KI270713v1_random 1155 2.83% 2
chr2 6572148 2.71% 6944
chr3 4642426 2.34% 4787
chr3_GL000221v1_random 794 0.51% 2
chr4 3008326 1.58% 3280
chr4_GL000008v2_random 264 0.13% 1
chr5 4346509 2.39% 4221
chr6 4255426 2.49% 4346
chr7 4439433 2.79% 4794
chr8 3867911 2.66% 4102
chr9 4071949 2.94% 4209
chr9_KI270719v1_random 271 0.15% 1
chr10 4391035 3.28% 4531
chr11 4351927 3.22% 4422
chr11_KI270721v1_random 259 0.26% 1
chr12 4089129 3.07% 4123
chr13 1876685 1.64% 2012
chr14 3327133 3.11% 3225
chr14_GL000009v2_random 367 0.18% 1
chr14_GL000194v1_random 1044 0.55% 2
chr14_KI270726v1_random 1938 4.43% 3
chr15 2783931 2.73% 3005
chr15_KI270727v1_random 2132 0.48% 3
chr16 4261666 4.72% 4403
chr16_KI270728v1_random 1302 0.07% 2
chr17 5756500 6.91% 5582
chr17_GL000205v2_random 12669 6.83% 9
chr18 1726796 2.15% 1846
chr19 4952002 8.45% 4940
chr20 2909728 4.52% 3124
chr21 1423591 3.05% 1519
chr22 3112586 6.12% 3190
chr22_KI270731v1_random 283 0.19% 1
chr22_KI270733v1_random 935 0.52% 3
chr22_KI270735v1_random 253 0.59% 1
chrUn_GL000195v1 823 0.45% 3
chrUn_GL000216v2 713 0.40% 2
chrUn_GL000219v1 3294 1.84% 5
chrUn_KI270438v1 2388 2.12% 4
chrUn_KI270742v1 250 0.13% 1
chrUn_KI270744v1 3026 1.80% 3
chrUn_KI270753v1 282 0.45% 1
chrX 1798284 1.15% 1949
chrY 2355 <0.01% 4
3321 contigs with no values (124007859 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93197 250 29027 968.4 532
global segment-length histogram

Files

Filename Size md5
ENCFF806JEJ.bed.gz 1.94 MB ec6e9f39f9028e86cd08988bcbb79195
ENCFF806JEJ.tabix.bed.gz 945.9 KB bb86bd07b7595caf9e993906103fc8be
ENCFF806JEJ.tabix.bed.gz.tbi 245.05 KB 822fa10aedb68555eb98056a81481bc5
genomic_resource.yaml 2.56 KB e652e580dfc905059051f5fa18d73b46
statistics/