Resource

Id Histone_ChIP-seq/ENCSR408ZEWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR408ZEW [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR408ZEW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue male adult (54 years)
  • date_created: 2016-03-19T00:39:39.605561+00:00
  • date_released: 2016-10-27
  • doi: 10.17989/ENCSR408ZEW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR408ZEW float

Histone_ChIP-seq_ENCSR408ZEW
Histone_ChIP-seq ENCSR408ZEW [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR408ZEW [1.66, 5.84]
n
7,211,922
mean
3.17
sd
0.507

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 72119220.22% 10874
chr1 499207 0.20% 774
chr2 596279 0.25% 926
chr3 510505 0.26% 811
chr4 636014 0.33% 979
chr5 580504 0.32% 895
chr6 452774 0.27% 717
chr7 436670 0.27% 656
chr8 358865 0.25% 564
chr9 289888 0.21% 440
chr10 337865 0.25% 505
chr11 315341 0.23% 504
chr12 369851 0.28% 544
chr13 308337 0.27% 495
chr14 211365 0.20% 332
chr15 176850 0.17% 267
chr16 110496 0.12% 144
chr17 102989 0.12% 157
chr18 173460 0.22% 284
chr19 513324 0.88% 526
chr20 97667 0.15% 148
chr21 102492 0.22% 163
chr22 29203 0.06% 40
chrX 1976 <0.01% 3
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10874 270 4880 663.23 580
global segment-length histogram

Files

Filename Size md5
ENCFF860RRD.bed.gz 201.75 KB 078dd66776f33bb4ee5a85d599b00348
ENCFF860RRD.tabix.bed.gz 108.92 KB 8c80a8a6e70af5063c49e442af879904
ENCFF860RRD.tabix.bed.gz.tbi 90.03 KB 4b1af44fcb4c2c66d6b5022d6e5cdaa4
genomic_resource.yaml 1.72 KB 487352e5dc1244725e78184dc574cd98
statistics/