Resource

Id Histone_ChIP-seq/ENCSR405YYGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR405YYG [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR405YYG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:03.151974+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR405YYG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR405YYG float

Histone_ChIP-seq_ENCSR405YYG
Histone_ChIP-seq ENCSR405YYG [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR405YYG [1.7, 14.5]
n
8,119,519
mean
4.66
sd
1.25

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 81195190.25% 18952
chr1 517685 0.21% 1244
chr2 578377 0.24% 1421
chr3 429145 0.22% 1064
chr4 490431 0.26% 1170
chr5 589030 0.32% 1345
chr6 387677 0.23% 971
chr7 440585 0.28% 1033
chr8 357905 0.25% 870
chr9 311113 0.22% 712
chr10 372657 0.28% 878
chr11 301769 0.22% 761
chr12 411336 0.31% 929
chr13 181666 0.16% 486
chr14 225204 0.21% 550
chr15 203821 0.20% 431
chr16 248805 0.28% 585
chr17 165746 0.20% 395
chr18 155863 0.19% 385
chr19 939079 1.60% 1618
chr20 165073 0.26% 397
chr21 121193 0.26% 286
chr22 88601 0.17% 210
chrX 436478 0.28% 1210
chrY 280 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18952 180 16918 428.43 359
global segment-length histogram

Files

Filename Size md5
ENCFF058RNM.bed.gz 339.75 KB 92797471233063cbd8043904f406c290
ENCFF058RNM.tabix.bed.gz 181.11 KB bde182df43ca883c785ffd4db9f89abe
ENCFF058RNM.tabix.bed.gz.tbi 128.54 KB 5ae54a5ab8f2e16485ba2cf9db470f85
genomic_resource.yaml 1.51 KB 40be949b6ebb03bb4f2b392c7f203ddc
statistics/