Resource

Id Histone_ChIP-seq/ENCSR404MOXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR404MOX [biosample_summary="Homo sapiens B cell male adult (21 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR404MOX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell male adult (21 years)
  • date_created: 2015-09-16T21:42:01.087891+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR404MOX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR404MOX float

Histone_ChIP-seq_ENCSR404MOX
Histone_ChIP-seq ENCSR404MOX [biosample_summary="Homo sapiens B cell male adult (21 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR404MOX [1.89, 16.6]
n
29,572,041
mean
5.41
sd
2.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 295720410.92% 51085
chr1 3004994 1.21% 5359
chr2 2377822 0.98% 4027
chr3 1536674 0.77% 2878
chr4 1163361 0.61% 1945
chr5 1611146 0.89% 2709
chr6 1926406 1.13% 3054
chr7 1472123 0.92% 2403
chr8 1203151 0.83% 2122
chr9 1343788 0.97% 2394
chr10 1539339 1.15% 2732
chr11 1663624 1.23% 2925
chr12 1466645 1.10% 2412
chr13 753659 0.66% 1239
chr14 903483 0.84% 1622
chr15 993841 0.97% 1769
chr16 897416 0.99% 1639
chr17 1721881 2.07% 2738
chr18 523381 0.65% 1016
chr19 1375069 2.35% 2183
chr20 976772 1.52% 1843
chr21 291401 0.62% 541
chr22 652198 1.28% 1152
chrX 171859 0.11% 375
chrY 2008 <0.01% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51085 185 14064 578.88 414
global segment-length histogram

Files

Filename Size md5
ENCFF169OGM.bed.gz 897.66 KB 139b16fbb5fcf56f98f16174d00f1f68
ENCFF169OGM.tabix.bed.gz 469.9 KB c33207f23dbfadf243f306f03402d90d
ENCFF169OGM.tabix.bed.gz.tbi 181.96 KB 9d59847bcd2e21b2cd8af0fe8e741756
genomic_resource.yaml 2.17 KB 99077b22f4358150196c3b6785591582
statistics/