Resource

Id Histone_ChIP-seq/ENCSR401KZWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR401KZW [biosample_summary="Homo sapiens spleen tissue male adult (26 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR401KZW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male adult (26 years)
  • date_created: 2020-05-01T03:06:10.251060+00:00
  • date_released: 2020-09-03
  • doi: 10.17989/ENCSR401KZW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (26 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR401KZW float

Histone_ChIP-seq_ENCSR401KZW
Histone_ChIP-seq ENCSR401KZW [biosample_summary="Homo sapiens spleen tissue male adult (26 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR401KZW [1.7, 67.7]
n
81,630,413
mean
12.2
sd
10.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 816304132.54% 58357
chr1 8135249 3.27% 5637
chr2 6198792 2.56% 4516
chr3 4980373 2.51% 3779
chr4 3036634 1.60% 2368
chr5 3835573 2.11% 2723
chr6 4462482 2.61% 3260
chr7 3600360 2.26% 2798
chr8 3131470 2.16% 2351
chr9 3490162 2.52% 2582
chr10 3956583 2.96% 2810
chr11 4458224 3.30% 2974
chr12 4393456 3.30% 3047
chr13 1708680 1.49% 1327
chr14 2927644 2.73% 2050
chr15 2927052 2.87% 2040
chr16 2885384 3.19% 2072
chr17 4798745 5.76% 3220
chr18 1346804 1.68% 1006
chr19 4291657 7.32% 2804
chr20 2423144 3.76% 1749
chr21 1034284 2.21% 737
chr22 2013277 3.96% 1309
chrX 1528449 0.98% 1143
chrY 65935 0.12% 55
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58357 220 28325 1398.81 990
global segment-length histogram

Files

Filename Size md5
ENCFF862CEW.bed.gz 1.28 MB d682701af210d83cc07308b308041b04
ENCFF862CEW.tabix.bed.gz 615.86 KB dc39f35c9aa631b6b08a66cacac2589e
ENCFF862CEW.tabix.bed.gz.tbi 214.06 KB 84871d7ec5b6d61b0dea3eab762f0575
genomic_resource.yaml 1.7 KB ebd6847b27a8e5c4d46c374db0597a63
statistics/