Resource

Id Histone_ChIP-seq/ENCSR391NPEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR391NPE [biosample_summary="Homo sapiens 22Rv1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR391NPE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002095/
  • biosample_summary: Homo sapiens 22Rv1
  • date_created: 2017-02-23T19:23:08.678511+00:00
  • date_released: 2017-03-03
  • doi: 10.17989/ENCSR391NPE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR391NPE float

Histone_ChIP-seq_ENCSR391NPE
Histone_ChIP-seq ENCSR391NPE [biosample_summary="Homo sapiens 22Rv1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR391NPE [1.21, 314]
n
90,960,214
mean
26.4
sd
32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 909602142.83% 45976
chr1 8763901 3.52% 4446
chr2 5963580 2.46% 3146
chr3 5278142 2.66% 2914
chr4 4694621 2.47% 2414
chr5 4700157 2.59% 2528
chr6 5409418 3.17% 2710
chr7 4770812 2.99% 2528
chr8 3682516 2.54% 1906
chr9 3722890 2.69% 1873
chr10 3500944 2.62% 1836
chr11 4928620 3.65% 2275
chr12 6209688 4.66% 3040
chr13 2122211 1.86% 1176
chr14 2604650 2.43% 1369
chr15 2428115 2.38% 1313
chr16 3421575 3.79% 1561
chr17 4670742 5.61% 2116
chr18 1522122 1.89% 859
chr19 4945601 8.44% 2177
chr20 1977156 3.07% 962
chr21 954325 2.04% 549
chr22 2229476 4.39% 986
chrM 386 2.33% 1
chrX 2348024 1.50% 1211
chrY 110542 0.19% 80
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45976 350 146314 1978.43 1428
global segment-length histogram

Files

Filename Size md5
ENCFF655WXZ.bed.gz 1.18 MB d7ab9c0670cb8d6051e0ef953a05bcf9
ENCFF655WXZ.tabix.bed.gz 525.74 KB 612b6ca68f76af312058ced098620ca3
ENCFF655WXZ.tabix.bed.gz.tbi 222.97 KB 82bb9dabe8f49e465cbb95bc6ef04387
genomic_resource.yaml 1.36 KB a711d47091b8134675470675878465c5
statistics/