Resource
| Id | Histone_ChIP-seq/ENCSR389TOA |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR389TOA [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K9ac"] |
| Description |
status: released biological_replicates: Rep 1 summary: 168 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR389TOA | float |
Histone_ChIP-seq_ENCSR389TOA |
Histone_ChIP-seq ENCSR389TOA [biosample_summary="Homo sapiens BLaER1 168 hours after the\ \ sample was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10\ \ ng/mL CSF1" and target="H3K9ac"]
|
 |
[1.2, 54.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 52903354 | 1.64% | 77347 |
| chr1 | 5286902 | 2.12% | 7732 |
| chr1_KI270712v1_random | 918 | 0.52% | 3 |
| chr1_KI270713v1_random | 658 | 1.61% | 1 |
| chr2 | 3541692 | 1.46% | 5255 |
| chr3 | 2943052 | 1.48% | 4321 |
| chr3_GL000221v1_random | 420 | 0.27% | 1 |
| chr4 | 1869429 | 0.98% | 2785 |
| chr5 | 2442027 | 1.35% | 3504 |
| chr6 | 2595344 | 1.52% | 3672 |
| chr7 | 2418273 | 1.52% | 3697 |
| chr8 | 2330370 | 1.61% | 3433 |
| chr9 | 2154274 | 1.56% | 3184 |
| chr10 | 2362842 | 1.77% | 3475 |
| chr11 | 3010392 | 2.23% | 4229 |
| chr12 | 2735301 | 2.05% | 3959 |
| chr13 | 904200 | 0.79% | 1339 |
| chr14 | 1813220 | 1.69% | 2652 |
| chr14_GL000194v1_random | 943 | 0.49% | 2 |
| chr15 | 1773432 | 1.74% | 2629 |
| chr16 | 2347522 | 2.60% | 3562 |
| chr17 | 3457362 | 4.15% | 4993 |
| chr17_GL000205v2_random | 9590 | 5.17% | 12 |
| chr18 | 778902 | 0.97% | 1176 |
| chr19 | 3517575 | 6.00% | 4670 |
| chr20 | 1542777 | 2.39% | 2383 |
| chr21 | 626702 | 1.34% | 947 |
| chr22 | 1379577 | 2.71% | 2130 |
| chr22_KI270731v1_random | 250 | 0.17% | 1 |
| chr22_KI270733v1_random | 711 | 0.40% | 2 |
| chrUn_GL000195v1 | 1344 | 0.73% | 3 |
| chrUn_GL000219v1 | 4188 | 2.34% | 7 |
| chrUn_KI270438v1 | 3776 | 3.36% | 5 |
| chrUn_KI270442v1 | 250 | 0.06% | 1 |
| chrX | 1048618 | 0.67% | 1580 |
| chrY | 521 | <0.01% | 2 |
| 3331 contigs with no values (127130654 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 77347 | 250 | 13374 | 683.97 | 397 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF738XEY.bed.gz | 1.51 MB | 8f16db27392c0149f10ca37c3580836b |
| ENCFF738XEY.tabix.bed.gz | 756.46 KB | 8272c1951c512e2cf7a892ae08620bf7 |
| ENCFF738XEY.tabix.bed.gz.tbi | 254.76 KB | 1600815d074aace4c5626a12c8422a42 |
| genomic_resource.yaml | 3.12 KB | 7f0c5f7301a168b1966ebe0d60afd1df |
| statistics/ |