Resource

Id Histone_ChIP-seq/ENCSR386CKJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR386CKJ [biosample_summary="Homo sapiens skin epidermis tissue male adult (75 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR386CKJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001003/
  • biosample_summary: Homo sapiens skin epidermis tissue male adult (75 years)
  • date_created: 2020-07-02T16:52:28.931927+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR386CKJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR386CKJ float

Histone_ChIP-seq_ENCSR386CKJ
Histone_ChIP-seq ENCSR386CKJ [biosample_summary="Homo sapiens skin epidermis tissue male adult (75 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR386CKJ [1.78, 86]
n
72,359,415
mean
13.7
sd
12.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 723594152.25% 60520
chr1 7833524 3.15% 6377
chr2 5151819 2.13% 4522
chr3 4056338 2.05% 3502
chr4 2051049 1.08% 1888
chr5 3066064 1.69% 2699
chr6 3776807 2.21% 3287
chr7 2916087 1.83% 2552
chr8 2586363 1.78% 2440
chr9 3385363 2.45% 2769
chr10 3413573 2.55% 2928
chr11 4230352 3.13% 3306
chr12 3785079 2.84% 3045
chr13 1199526 1.05% 1170
chr14 2720298 2.54% 2163
chr15 2444972 2.40% 2103
chr16 2967441 3.28% 2495
chr17 4769059 5.73% 3656
chr18 1198775 1.49% 1100
chr19 4302339 7.34% 3140
chr20 2187632 3.39% 1759
chr21 894973 1.92% 850
chr22 2193083 4.32% 1676
chrX 1197810 0.77% 1071
chrY 31089 0.05% 22
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60520 215 25174 1195.63 810
global segment-length histogram

Files

Filename Size md5
ENCFF240EGF.bed.gz 1.45 MB af4d526d5acc175999f4d38cee743292
ENCFF240EGF.tabix.bed.gz 659.77 KB 0e348afc1432cec302f401a6e73bb356
ENCFF240EGF.tabix.bed.gz.tbi 208.41 KB 1ad560321e722461881a92bc65359179
genomic_resource.yaml 1.72 KB 4cbe32ac860553f9d9c42049b918b4d4
statistics/