Resource

Id Histone_ChIP-seq/ENCSR380KTUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR380KTU [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR380KTU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:09.529799+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR380KTU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 36 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR380KTU float

Histone_ChIP-seq_ENCSR380KTU
Histone_ChIP-seq ENCSR380KTU [biosample_summary="Homo sapiens BLaER1 36 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR380KTU [1.15, 56.8]
n
111,055,891
mean
9.17
sd
8.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1110558913.45% 74901
chr1 3400426 1.37% 2416
chr1_KI270709v1_random 713 1.07% 2
chr1_KI270712v1_random 24509 13.92% 23
chr1_KI270713v1_random 8304 20.38% 4
chr1_KI270714v1_random 7686 18.42% 10
chr2 2528747 1.04% 1800
chr3 1446907 0.73% 1078
chr4 1051801 0.55% 796
chr5 1529412 0.84% 1070
chr6 1766233 1.03% 1202
chr7 1605805 1.01% 1154
chr8 1543768 1.06% 1142
chr9 1449098 1.05% 1107
chr9_KI270717v1_random 1517 3.79% 3
chr10 1711881 1.28% 1280
chr11 1869168 1.38% 1280
chr12 1697228 1.27% 1017
chr13 731909 0.64% 486
chr14 909295 0.85% 650
chr14_KI270725v1_random 360 0.21% 1
chr15 1195715 1.17% 818
chr16 1360269 1.51% 984
chr17 2351199 2.82% 1578
chr18 463597 0.58% 403
chr19 1503160 2.56% 998
chr20 1081271 1.68% 771
chr21 401539 0.86% 371
chr22 958064 1.89% 712
chr22_KI270733v1_random 4107 2.28% 6
chrUn_GL000195v1 250 0.14% 1
chrUn_GL000220v1 1365 0.84% 2
chrUn_GL000224v1 284 0.16% 1
chrUn_KI270438v1 2445 2.17% 4
chrUn_KI270544v1 290 24.13% 1
chrUn_KI270744v1 4972 2.95% 4
chrUn_KI270753v1 263 0.42% 1
chrX 78439377 50.27% 51716
chrY 2957 0.01% 9
3328 contigs with no values (127489562 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74901 250 142651 1482.7 673
global segment-length histogram

Files

Filename Size md5
ENCFF157YZN.bed.gz 1.44 MB 55cca0d11c6fbed5b4460ea1603d7283
ENCFF157YZN.tabix.bed.gz 723.9 KB 3e2a9a6a9885a01d378b7e228fd5fac1
ENCFF157YZN.tabix.bed.gz.tbi 113.43 KB d0f7ea11b6aab78c3842b5a1488f2475
genomic_resource.yaml 3.12 KB 6808e6995596ad4af73043591c9743ae
statistics/