Resource

Id Histone_ChIP-seq/ENCSR380KOOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR380KOO [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR380KOO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002686/
  • biosample_summary: Homo sapiens angular gyrus tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:22.991287+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR380KOO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR380KOO float

Histone_ChIP-seq_ENCSR380KOO
Histone_ChIP-seq ENCSR380KOO [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR380KOO [1.7, 24.9]
n
61,524,068
mean
6.43
sd
2.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 615240681.91% 73956
chr1 6593824 2.65% 7599
chr2 4319895 1.78% 5249
chr3 3741740 1.89% 4589
chr4 2284914 1.20% 2914
chr5 3189719 1.76% 3838
chr6 3196624 1.87% 3839
chr7 2615064 1.64% 3363
chr8 2247664 1.55% 2846
chr9 3002320 2.17% 3495
chr10 3169844 2.37% 3661
chr11 3897965 2.89% 4507
chr12 3117392 2.34% 3805
chr13 1330223 1.16% 1651
chr14 2167682 2.03% 2523
chr15 2184391 2.14% 2627
chr16 2185359 2.42% 2696
chr17 3555466 4.27% 4070
chr18 1090411 1.36% 1356
chr19 2799339 4.78% 3393
chr20 1842463 2.86% 2177
chr21 585151 1.25% 739
chr22 1570142 3.09% 1805
chrX 816713 0.52% 1192
chrY 19763 0.03% 22
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73956 200 20592 831.9 631
global segment-length histogram

Files

Filename Size md5
ENCFF684COM.bed.gz 1.52 MB 884fb7b5d906f3ee7e1a6e4b3fc81aec
ENCFF684COM.tabix.bed.gz 751.2 KB ac23b99d2d62bfc601c7d63566e646e1
ENCFF684COM.tabix.bed.gz.tbi 215.13 KB 4393f96dc56b87b20fa3d639ae212326
genomic_resource.yaml 1.5 KB b6209570c55639420f368f058307d687
statistics/