Resource

Id Histone_ChIP-seq/ENCSR379WXMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR379WXM [biosample_summary="Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR379WXM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence
  • date_created: 2015-09-15T20:27:15.334205+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR379WXM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (15 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR379WXM float

Histone_ChIP-seq_ENCSR379WXM
Histone_ChIP-seq ENCSR379WXM [biosample_summary="Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR379WXM [1.62, 79.3]
n
71,941,098
mean
12.9
sd
8.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 719410982.24% 61398
chr1 6929727 2.78% 5910
chr2 5549488 2.29% 4796
chr3 4804921 2.42% 4026
chr4 3310995 1.74% 2814
chr5 4101284 2.26% 3331
chr6 4315970 2.53% 3633
chr7 3603180 2.26% 3148
chr8 3260235 2.25% 2815
chr9 3038503 2.20% 2633
chr10 3123918 2.33% 2706
chr11 4250519 3.15% 3547
chr12 3363390 2.52% 2832
chr13 1822980 1.59% 1541
chr14 2650072 2.48% 2191
chr15 2288620 2.24% 1933
chr16 2236168 2.48% 1901
chr17 3679861 4.42% 2992
chr18 1493781 1.86% 1287
chr19 2723198 4.65% 2409
chr20 1769596 2.75% 1525
chr21 625739 1.34% 560
chr22 1315294 2.59% 1154
chrX 1683659 1.08% 1714
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61398 190 33361 1171.72 777
global segment-length histogram

Files

Filename Size md5
ENCFF886NZJ.bed.gz 1.55 MB 742c0be0bfee30ecc1f5206c140ed6b1
ENCFF886NZJ.tabix.bed.gz 680.75 KB 2038ece4e39640cd105fa605da9335bc
ENCFF886NZJ.tabix.bed.gz.tbi 233.33 KB 1426a36423e2c130099962715a624900
genomic_resource.yaml 1.57 KB c7041ae89df8a3ae202b2a336eab0e85
statistics/