Resource

Id Histone_ChIP-seq/ENCSR379SOGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR379SOG [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR379SOG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (59 years)
  • date_created: 2021-08-25T18:06:45.218594+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR379SOG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR379SOG float

Histone_ChIP-seq_ENCSR379SOG
Histone_ChIP-seq ENCSR379SOG [biosample_summary="Homo sapiens heart right ventricle tissue female adult (59 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR379SOG [1.63, 8.77]
n
88,564,787
mean
3.59
sd
0.957

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 885647872.75% 96684
chr1 9002245 3.62% 9592
chr2 6988381 2.89% 7711
chr3 6028060 3.04% 6704
chr4 3055684 1.61% 3721
chr5 4652930 2.56% 5283
chr6 4607478 2.70% 5401
chr7 4053266 2.54% 4716
chr8 3690657 2.54% 4291
chr9 4018549 2.90% 4208
chr10 5063562 3.78% 5297
chr11 4905963 3.63% 5169
chr12 4447057 3.34% 4722
chr13 2061704 1.80% 2357
chr14 3050573 2.85% 3214
chr15 3262157 3.20% 3532
chr16 3173571 3.51% 3377
chr17 4918693 5.91% 4886
chr18 1648503 2.05% 2065
chr19 3405757 5.81% 3448
chr20 2694407 4.18% 2839
chr21 829772 1.78% 968
chr22 2502961 4.93% 2449
chrX 502857 0.32% 734
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 96684 225 19748 916.02 701
global segment-length histogram

Files

Filename Size md5
ENCFF878IEP.bed.gz 2.06 MB 794dcef9daddc464c67e75f1ca2da6f5
ENCFF878IEP.tabix.bed.gz 1012.93 KB 2a7c878662c99a48dda2b57969fc9da2
ENCFF878IEP.tabix.bed.gz.tbi 275.33 KB 824074355dd369a383a8d88f539806f6
genomic_resource.yaml 1.54 KB c57717d75b73a7dfc167980f732ec7bf
statistics/