Resource

Id Histone_ChIP-seq/ENCSR379DNMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR379DNM [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR379DNM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:40.012234+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR379DNM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR379DNM float

Histone_ChIP-seq_ENCSR379DNM
Histone_ChIP-seq ENCSR379DNM [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR379DNM [1.72, 22.5]
n
98,183,572
mean
6.14
sd
3.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 981835723.05% 73726
chr1 9997084 4.02% 7376
chr2 7150811 2.95% 5474
chr3 5907396 2.98% 4476
chr4 3851463 2.02% 2904
chr5 5194923 2.86% 3905
chr6 5064138 2.96% 3740
chr7 4465627 2.80% 3579
chr8 3816297 2.63% 2953
chr9 4830065 3.49% 3509
chr10 5076392 3.79% 3619
chr11 6103696 4.52% 4379
chr12 4951228 3.72% 3839
chr13 2184560 1.91% 1663
chr14 3389615 3.17% 2468
chr15 3536234 3.47% 2643
chr16 3448832 3.82% 2632
chr17 5548276 6.66% 4058
chr18 1923846 2.39% 1510
chr19 4208719 7.18% 3097
chr20 2880704 4.47% 2163
chr21 1042460 2.23% 811
chr22 2391329 4.71% 1775
chrX 1219877 0.78% 1153
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 73726 215 63105 1331.74 880
global segment-length histogram

Files

Filename Size md5
ENCFF474VLR.bed.gz 1.57 MB 6a7fcacd04e7174075a12fa6c9aec9b8
ENCFF474VLR.tabix.bed.gz 765.57 KB bea46dcb3f8b3f0f85a6451d2c6bba8b
ENCFF474VLR.tabix.bed.gz.tbi 222.81 KB c83204a3870d842cdf83ecc96207db6b
genomic_resource.yaml 1.77 KB b7647401c2e12737ab38a0543fccd0db
statistics/