Resource

Id Histone_ChIP-seq/ENCSR379BVLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR379BVL [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR379BVL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (51 years)
  • date_created: 2017-07-28T10:06:34.534375+00:00
  • date_released: 2018-12-15
  • doi: 10.17989/ENCSR379BVL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR379BVL float

Histone_ChIP-seq_ENCSR379BVL
Histone_ChIP-seq ENCSR379BVL [biosample_summary="Homo sapiens adrenal gland tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR379BVL [1.43, 8.56]
n
57,356,268
mean
3.55
sd
0.861

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 573562681.78% 50153
chr1 6123671 2.46% 5189
chr2 4615119 1.91% 4021
chr3 3750609 1.89% 3373
chr4 2111918 1.11% 1955
chr5 2866866 1.58% 2522
chr6 2870884 1.68% 2681
chr7 2630352 1.65% 2387
chr8 2443822 1.68% 2202
chr9 2615483 1.89% 2276
chr10 2918992 2.18% 2515
chr11 3170066 2.35% 2686
chr12 3122677 2.34% 2684
chr13 1146941 1.00% 1088
chr14 1906717 1.78% 1670
chr15 1853947 1.82% 1659
chr16 2178904 2.41% 1883
chr17 3332832 4.00% 2775
chr17_GL000205v2_random 529 0.29% 1
chr18 1112290 1.38% 996
chr19 2397598 4.09% 2083
chr20 1747726 2.71% 1449
chr21 537420 1.15% 456
chr22 1552391 3.05% 1230
chrM 13222 79.80% 5
chrUn_GL000219v1 734 0.41% 1
chrUn_KI270337v1 531 47.37% 1
chrUn_KI270438v1 613 0.54% 1
chrUn_KI270466v1 1053 85.40% 1
chrUn_KI270467v1 1719 43.85% 1
chrX 330642 0.21% 362
3336 contigs with no values (185804363 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50153 285 16202 1143.63 942
global segment-length histogram

Files

Filename Size md5
ENCFF322AYV.bed.gz 1.13 MB 779b120a6d5850018bb09434cc301d02
ENCFF322AYV.tabix.bed.gz 544.86 KB ff4d1b3c8f14c9d6378b3765eddd4480
ENCFF322AYV.tabix.bed.gz.tbi 205.69 KB 21d6c8355f5bbb123fff057dfd4c5482
genomic_resource.yaml 1.51 KB aeaeb4d978c23f835ccf13b33b0cee1c
statistics/