Resource

Id Histone_ChIP-seq/ENCSR377RPJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR377RPJ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (56 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR377RPJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (56 years)
  • date_created: 2021-08-25T18:08:04.654433+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR377RPJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR377RPJ float

Histone_ChIP-seq_ENCSR377RPJ
Histone_ChIP-seq ENCSR377RPJ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (56 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR377RPJ [1.59, 13.5]
n
200,628,971
mean
4.63
sd
1.64

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2006289716.24% 158616
chr1 19956097 8.02% 15375
chr2 16685878 6.89% 13116
chr3 13942416 7.03% 11013
chr4 8080411 4.25% 6962
chr5 10894632 6.00% 8748
chr6 11857083 6.94% 9573
chr7 9173881 5.76% 7771
chr8 8769048 6.04% 7212
chr9 8770198 6.34% 6896
chr10 10674700 7.98% 8389
chr11 10434652 7.72% 8136
chr12 10428069 7.82% 8024
chr13 4760299 4.16% 3980
chr14 6752235 6.31% 5052
chr15 7401082 7.26% 5579
chr16 6625211 7.33% 5081
chr17 10160128 12.20% 7385
chr18 3668866 4.56% 3208
chr19 6725610 11.47% 5234
chr20 5737937 8.90% 4290
chr21 2390819 5.12% 1865
chr22 4325969 8.51% 3217
chrX 2413750 1.55% 2510
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 158616 210 43939 1264.87 869
global segment-length histogram

Files

Filename Size md5
ENCFF130BCN.bed.gz 3.47 MB 626ddd01930ff00c9b08233887e94bce
ENCFF130BCN.tabix.bed.gz 1.62 MB b6514fd0ffb2a72c472a65e2040e95da
ENCFF130BCN.tabix.bed.gz.tbi 323.14 KB 24fb79b4748b4efeef366c62bbe6530f
genomic_resource.yaml 1.54 KB 5292c4278310ec57b2c22ce1cc41294a
statistics/