Resource

Id Histone_ChIP-seq/ENCSR377MRRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR377MRR [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR377MRR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001606/
  • biosample_summary: Homo sapiens foreskin keratinocyte male newborn
  • date_created: 2015-09-15T20:26:35.293504+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR377MRR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR377MRR float

Histone_ChIP-seq_ENCSR377MRR
Histone_ChIP-seq ENCSR377MRR [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR377MRR [1.54, 8.71]
n
5,972,114
mean
3.63
sd
0.922

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 59721140.19% 8281
chr1 579017 0.23% 811
chr2 480967 0.20% 656
chr3 287118 0.14% 428
chr4 285364 0.15% 388
chr5 316706 0.17% 470
chr6 403386 0.24% 578
chr7 332546 0.21% 443
chr8 284395 0.20% 387
chr9 240297 0.17% 347
chr10 360188 0.27% 461
chr11 311498 0.23% 430
chr12 238105 0.18% 346
chr13 193508 0.17% 270
chr14 245480 0.23% 337
chr15 200296 0.20% 283
chr16 150775 0.17% 222
chr17 340893 0.41% 429
chr18 133181 0.17% 194
chr19 207125 0.35% 273
chr20 221460 0.34% 294
chr21 54309 0.12% 76
chr22 63632 0.13% 96
chrX 41868 0.03% 62
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 8281 210 5670 721.18 563
global segment-length histogram

Files

Filename Size md5
ENCFF177JVQ.bed.gz 179.92 KB f6a8fb187474ce96fe9029afa2afbfd6
ENCFF177JVQ.tabix.bed.gz 87.02 KB 570afb75d0aabf5780c180ae11048250
ENCFF177JVQ.tabix.bed.gz.tbi 48.9 KB 212c42358a944a25fdc5b758e5153c30
genomic_resource.yaml 1.96 KB 9e2b78625236f2bc7a40dbf9d9bc9af3
statistics/